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Peter S. White, Ph.D.

Peter S. White, Ph.D.

faculty photo
Research Associate Professor of Pediatrics
Department: Pediatrics
Graduate Group Affiliations

Contact information
CHOP
34th & CIVIC CENTER
Room 1407/CHOP North
Philadelphia, PA 19104-4399
Office: 215-590-5241
Fax: 215-590-5245
Education:
B.S. (Biology)
University of Oregon, 1986.
Ph.D. (Molecular Genetics)
Washington University, 1992.
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Description of Research Expertise

Dr. White oversees informatics research and resources at The Children's Hospital of Philadelphia, including genome-enabled medicine, clinical informatics, software development, educational, and bioinformatics activities. In addition, he has an active laboratory that is developing genomic analysis, natural language processing, data integration, and knowledge representation methods to help determine the molecular etiologies of particular pediatric diseases. Disorders of current interest include childhood cancer, diseases identified by newborn screening, and congenital cardiac defects. Dr. White plays a lead informatics role on a number of national data projects, including the NICHD Newborn Screening Translational Research Network, the NHLBI Bench to Bassinet Program, the NHGRI Clinical Sequencing and Exploratory Research Consortium, and the NIDCD Audiology and Genetics Database.

Selected Publications

Pennington Jeffrey W, Ruth Byron, Italia Michael J, Miller Jeffrey, Wrazien Stacey, Loutrel Jennifer G, Crenshaw E Bryan, White Peter S: Harvest: an open platform for developing web-based biomedical data discovery and reporting applications. Journal of the American Medical Informatics Association : JAMIA Oct 2013.

Tarczy-Hornoch Peter, Amendola Laura, Aronson Samuel J, Garraway Levi, Gray Stacy, Grundmeier Robert W, Hindorff Lucia A, Jarvik Gail, Karavite Dean, Lebo Matthew, Plon Sharon E, Van Allen Eliezer, Weck Karen E, White Peter S, Yang Yaping: A survey of informatics approaches to whole-exome and whole-genome clinical reporting in the electronic health record. Genetics in medicine : official journal of the American College of Medical Genetics 15(10): 824-32, Oct 2013.

Zaidi Samir, Choi Murim, Wakimoto Hiroko, Ma Lijiang, Jiang Jianming, Overton John D, Romano-Adesman Angela, Bjornson Robert D, Breitbart Roger E, Brown Kerry K, Carriero Nicholas J, Cheung Yee Him, Deanfield John, DePalma Steve, Fakhro Khalid A, Glessner Joseph, Hakonarson Hakon, Italia Michael J, Kaltman Jonathan R, Kaski Juan, Kim Richard, Kline Jennie K, Lee Teresa, Leipzig Jeremy, Lopez Alexander, Mane Shrikant M, Mitchell Laura E, Newburger Jane W, Parfenov Michael, Pe'er Itsik, Porter George, Roberts Amy E, Sachidanandam Ravi, Sanders Stephan J, Seiden Howard S, State Mathew W, Subramanian Sailakshmi, Tikhonova Irina R, Wang Wei, Warburton Dorothy, White Peter S, Williams Ismee A, Zhao Hongyu, Seidman Jonathan G, Brueckner Martina, Chung Wendy K, Gelb Bruce D, Goldmuntz Elizabeth, Seidman Christine E, Lifton Richard P: De novo mutations in histone-modifying genes in congenital heart disease. Nature 498(7453): 220-3, Jun 2013.

D'Alessandro Lisa C A, Werner Petra, Xie Hongbo M, Hakonarson Hakon, White Peter S, Goldmuntz Elizabeth: The Prevalence of 16p12.1 Microdeletion in Patients with Left-sided Cardiac Lesions. Congenital heart disease May 2013.

Breitbart RE, Brueckner, M, Chung WK, Colan SD, Deanfield J, Gelb BD, Giadini A, Goldmuntz E, Hakonarson H, Kaltman JR, Kaski JP, Kim RW, Kline JK, Lifton RP, Lu M, Mercer LM, Mitchell LE, Newburger JW, Peter, I, Porter GA, Roberts AE, Rosenberg ER, Sachidanandam R, Seiden HS, Seidman CE, Seidman JG, Sleeper LA, Tennstedt, SL, Warburton D, White PS, Williams IA.: The Congenital Heart Disease Genetic Network Study: rationale, design, and early results. Circulation Research 112: 698-706, 2013.

75. Zaidi S, Choi M, Wakimoto H, Ma L, Jianming J, Overton JD, Bjornson RD, Breitbart R, Carriero NJ, Cheung YH, Deanfield J, Glessner J, Hakonarson H, Italia M, Kaltman JR, Kaski J, Kim R, Kline JK, Lee T, Leipzig J, Alexander Lopez, Mane SM, Mitchell LE, Newburger J, Pe'er I, Porter G, Roberts A, Sachidanandam R, Sanders S, Seiden HS, State M, Subramanian S, Tikhonova IR, Warburton D, Wei Z, White PS, Williams IA, Zhao H, Seidman J, Brueckner M, Chung WK, Gelb BD, Goldmuntz E, Seidman CE, Lifton RP: Increased frequency of de novo mutations in histone modifying genes in congenital heart disease. Nature 498: 220-223, 2013.

Tropeano Maria, Ahn Joo Wook, Dobson Richard J B, Breen Gerome, Rucker James, Dixit Abhishek, Pal Deb K, McGuffin Peter, Farmer Anne, White Peter S, Andrieux Joris, Vassos Evangelos, Ogilvie Caroline Mackie, Curran Sarah, Collier David A: Male-biased autosomal effect of 16p13.11 copy number variation in neurodevelopmental disorders. PloS one 8(4): e61365, 2013.

Gai X, Xie H M, Perin J C, Takahashi N, Murphy K, Wenocur A S, D'arcy M, O'Hara R J, Goldmuntz E, Grice D E, Shaikh T H, Hakonarson H, Buxbaum J D, Elia J, White P S: Rare structural variation of synapse and neurotransmission genes in autism. Molecular Psychiatry Mar 2012.

Elia Josephine, Glessner Joseph T, Wang Kai, Takahashi Nagahide, Shtir Corina J, Hadley Dexter, Sleiman Patrick M A, Zhang Haitao, Kim Cecilia E, Robison Reid, Lyon Gholson J, Flory James H, Bradfield Jonathan P, Imielinski Marcin, Hou Cuiping, Frackelton Edward C, Chiavacci Rosetta M, Sakurai Takeshi, Rabin Cara, Middleton Frank A, Thomas Kelly A, Garris Maria, Mentch Frank, Freitag Christine M, Steinhausen Hans-Christoph, Todorov Alexandre A, Reif Andreas, Rothenberger Aribert, Franke Barbara, Mick Eric O, Roeyers Herbert, Buitelaar Jan, Lesch Klaus-Peter, Banaschewski Tobias, Ebstein Richard P, Mulas Fernando, Oades Robert D, Sergeant Joseph, Sonuga-Barke Edmund, Renner Tobias J, Romanos Marcel, Romanos Jasmin, Warnke Andreas, Walitza Susanne, Meyer Jobst, Pálmason Haukur, Seitz Christiane, Loo Sandra K, Smalley Susan L, Biederman Joseph, Kent Lindsey, Asherson Philip, Anney Richard J L, Gaynor J William, Shaw Philip, Devoto Marcella, White Peter S, Grant Struan F A, Buxbaum Joseph D, Rapoport Judith L, Williams Nigel M, Nelson Stanley F, Faraone Stephen V, Hakonarson Hakon: Genome-wide copy number variation study associates metabotropic glutamate receptor gene networks with attention deficit hyperactivity disorder. Nature Genetics 44(1): 78-84, Jan 2012.

Masino AJ, Italia MJ, Davidson LM, White PS. : Research hospital data ETL with DataExpress: A Scala DSL for rapid ETL configuration and execution. Proceedings of Scala Days 2012.

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Last updated: 10/30/2013
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