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Doron C. Greenbaum, Ph.D.

Doron C. Greenbaum, Ph.D.

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Assistant Professor of Pharmacology
Department: Pharmacology

Contact information
Department of Pharmacology
304G Lynch Labs
433 South University Avenue
Philadelphia, PA 19104-6018
Philadelphia, PA 19104-6019
Office: (215) 746-2992
Fax: (215) 746-6697
Education:
B.A. (Biology and Chemistry, Magna cum laude)
Williams College, Williamstown, MA, 1994.
Ph.D. (Pharmaceutical Chemistry)
University of California, San Francisco, 2002.
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Description of Research Expertise

Research Interests

Dr. Greenbaum's laboratory is developing and exploiting new technologies at the interface between biology and chemistry to study protease function. The lab uses a variety of techniques including the synthesis of small molecule inhibitors, quantitative proteomics, recombinant protein expression and molecular genetics in order to better understand proteolytic systems. Although these tools are useful to study any biological system, the laboratory is concentrating on understanding host and parasite proteases that are important for P.falciparum, the causative agent of malaria.

Malaria is a devastating global disease causing at least 500 million clinical cases and more than 1 million deaths each year. Currently quinolines and anti-folates are the most commonly used drugs for disease prevention and treatment. However, multi-drug resistant Plasmodium falciparum has become a major problem. Therefore, discovery and investigation of known and/or novel targets for anti-malarial compounds is essential to develop new ways to combat this disease.

Dr. Greenbaum has developed universal chemical-based proteomics tools to functionally analyze the role of proteases in a variety of biological systems. He also adapted these chemical tools to allow screening of small molecule libraries for specific inhibitors and drug design. His lab will continue to develop new chemical proteomic tools and small molecule libraries to facilitate protease drug target discovery, characterization and therapeutic design with a particular interest in malaria.

The chemical probes that Dr. Greenbaum is developing led to the recent discovery that parasites such as plasmodium and toxoplasma hijack host calpains in order to facilitate their escape (Chandramonanadas et al, Science 324:794-7; 2009). This surprising finding suggests the concept of targeting host pathways for chemotherapy, a strategy that might limit the emergence of drug-resistance.

Selected Publications

Greenbaum DC: Is chemical genetics the new frontier for malaria biology? Tr Pharmacol Sci 29: 51-56, 2008.

Sanders PR, Cantin GT, Greenbaum DC, Gilson PR, Nebl T, Moritz RL, Yates JR 3rd, Hodder AN, Crabb BS: Identification of protein complexes in detergent-resistant membranes of Plasmodium falciparum schizonts. Mol Biochem Parasit 154: 148-157, 2007.

Choe Y, Leonetti F, Greenbaum DC, Lecaille F, Bogyo M, Bromme D, Ellman JA, Craik CS: Substrate profiling of cysteine proteases using a combinatorial peptide library identifies functionally unique specificities. J Biol Chem 281: 12824-12832, 2006.

Sanders PR, Gilson PR, Cantin GT, Greenbaum DC, Nebl T, Carucci DJ, McConville MJ, Schofield L, Hodder AN, Yates JR 3rd, Crabb BS: Distinct protein classes including novel merozoite surface antigens in Raft-like membranes of Plasmodium falciparum. J Biol Chem 280: 40169-40176, 2005.

Joyce J, Baruch A, Chehade K, Meyer-Morse N, Giraudo E, Tsai F, Greenbaum, D, Hager J, Bogyo M, Hanahan D: Cathepsin cysteine proteases are effectors of invasive tumor growth and angiogenesis during multistage tumorigenesis. Cancer Cell 5: 443-453, 2004.

Eksi S, Czesny B, Greenbaum D, Bogyo M, Williamson K: Targeted disruption of Plasmodium Falciparum cysteine protease, Falcipain 1, reduces oocyst production, not erythrocytic stage growth. Mol Microbiol 53: 243-250, 2004.

Oleksy A, Golonka E, Banbula A, Szmyd G, Moon J, Kubica M, Greenbaum D, Bogyo M, Foster TJ, Travis J, Potempa J: Growth phase-dependent production of a cell wall-associated elastinolytic cysteine proteinase by Staphylococcus epidermidis. Biol Chem 385: 525-535, 2004.

Greenbaum DC, Mackey Z, Hansell E, Doyle P, Gut J, Caffrey CR, Lehrman J, Rosenthal PJ, McKerrow JH, Chibale K: Synthesis and structure-activity relationships of parasiticidal thiosemicarbazone cysteine protease inhibitors against Plasmodium falciparum, Trypanosoma brucei, and Trypanosoma cruzi. J Med Chem 47: 3212-3219, 2004.

Yasuda Y, Li Z, Greenbaum D, Bogyo M, Weber E, Bromme D: Cathepsin V, a novel and potent elastolytic activity expressed in activated macrophages. J Biol Chem 279: 36761-36770, 2004.

Mackey Z, O’Brien T, Greenbaum D, Blank R, McKerrow JH: A cathepsin B-like protease is required for host protein degradation in Trypanosoma brucei. J Biol Chem 279: 48426-48433, 2004.

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Last updated: 09/29/2009
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