Amit Bahl
Research Associate, Merck and Company
Thesis title and defense date: Design and Application of Multi-functional Microarrays for Toxoplasma gondii, January 2008
Irina Bochkis
Post-doctoral Fellow, Regev Lab, Broad Institute
Thesis title and defense date: Hepatic Metabolic Regulatory Networks of Foxa2, November 20, 2008.
Jun Chen
Post-doctoral Fellow, Lin Lab, Harvard University
Thesis title and defense date: Statistical Methods for Human Microbiome Data Analysis, June 5, 2012.
ZhongQiang (John) Chen
Post-doctoral Fellow, Roos Lab, University of Pennsylvania
Thesis title and defense date: Identification of proteins associated with specialized (secretory) organelles in apicomplexan parasites, December 10, 2009.
Ryan Coleman
Post-doctoral fellow, Shoichet Lab, University of California-San Francisco
Thesis title and defense date: Shortest Geometric Paths Analysis in Structural Biology, August 28, 2009.
Sharon Diskin
Assistant Professor, Children's Hospital of Philadelphia
Thesis title and defense date: The Role of Germline and Tumor DNA Copy Number in Neuroblastoma Tumorgenesis, April 22, 2008.
Perry Evans
Post-doctoral fellow, Krauthammer Lab, Yale University
Thesis title and defense date: Modeling virus-host networks, July 29, 2010.
Logan Everett
Post-doctoral fellow, Lazar Lab, University of Pennsylvania
Thesis title and defense date: Genomic Methods for Studying the Post-Translational Regulation of Transcription Factors, July 16, 2010.
Adam Ewing
Post-doctoral fellow, University of California, Santa Cruz
Thesis title and defense date: The Role of L1 Retrotransposition in Human Genomic Variability, September 14, 2010.
Sheng Guo
Statistical Geneticist, Syngenta Biotechnology, Inc.
Thesis title and defense date: Computational Analysis and Application of Genotype and Phenotype on Drosophilia Odorant Receptors and RNA, September 26. 2008.
Dexter Hadley
Lead Clinical Data Analysis, Center
for Applied Genomics, Children's Hospital of Philadelphia
Thesis title and defense date: Genome-scale annotation of genetic factors underluying neurotransmission and neuropsychiatric disease, October 2007
Marcin Imielinski
Postdoctoral Fellow, Meyerson Lab, Broad Institute of MIT and Harvard
Clinical Fellow, Pathology, Massachusetts General Hospital
Thesis title and defense date: In silico analysis of microbial biosynthetic capabilities at the genome scale, December 2005
Rumen Kostadinov
Post-doctoral Associate, Irizarry Lab, Johns Hopkins University
Thesis title and defense date: Evolutionary Dynamics of Neoplastic Cell Populations in Barrett's Esophagus, March 26, 2012.
Miler Lee
Post-doctoral Associate, Department of Genetics, Yale School of Medicine
Thesis title and defense date: Modular Organization and Composability of RNA, October 9, 2009.
Zhandong Liu
Assistant Professor, Department of Pediatrics, Baylor College of Medicine
Thesis title and defense date: The Quantative Prediction of Signal Pathway Activity through Genome-wide Gene Expression Data, April 15, 2010.
Molly Megraw
Uwe Ohler Lab, Duke University
Thesis title and defense date: Regulation of MicroRNA Transcription, June 2007
Rithun Mukherjee
Post-doctoral fellow,
Fred Hutchinson Cancer Research Center
Thesis title and defense date: Viral Diversity by Deep Sequencing: Approaches to Analyzing Effects of anti-HIV Treatments, September 30, 2011.
Thomas Petty
Post-doctoral fellow, Swiss
Institute of Bioinformatics
Thesis title and defense date: The Structure of a Multidomain P53 Oligomer Bound to DNA; Applications of Probabilistic Protein Design, January 4, 2010.
Jeremy Purvis
Post-doctoral Fellow, Galit Lahav Laboratory, Department of Systems Biology, Harvard University
Thesis title and defense date: A Systems Approach to Cellular Signal Transduction, June 2009
Praveen Sethupathy
Assistant Professor of Genetics, University of North Carolina-Chapel Hill
Thesis title and defense date: Analysis on the Role of Gene Regulatory Elements in Human Health and Evolution, March 2008
Daniel Simola
Post-doctoral Fellow, Berger Lab, University of Pennsylvania
Thesis title and defense date: Evolution of Genome-Wide Gene Regulation in the Budding Yeast Cell- Division Cycle, September 3, 2009.
Kathleen Sprouffske
Post-doctoral Fellow, University of Zurich
Thesis title and defense date: Modeling the evolutionary and differentiation dynamics of neoplastic progression, January 21, 2011.
Geetu Tuteja
Post-doctoral Fellow, Stanford University
Thesis title and defense date: Illuminating Transcriptional Regulation with Genome-wide Binding Data, December 15, 2008.
Zhi Wei
Assistant Professor, Computer Science Department, New Jersey Institute of Technology
Thesis title and defense date: Statistics Methods for Network-Based Analysis on Genomic Data, March 2008
