University of Pennsylvania
DNA Sequencing Facility

Commercial Softare

The Penn Molecular Profiling Group offers a number of excellent desktop sequencing analysis options for very reasonable licensing fees.

Free Software

ABI Peak Scanner
For visualization of genotyping / fragment sizing data generated by ABI Genetic Analyzers.
ABI Sequence Scanner
For visualization of sequencing data generated by ABI Genetic Analyzers.
Agilent Bioanalyzer Expert Software
For visualization of fragment sizing data generated by Agilent 2100 bioanalyzer.
FinchTV
For visualization of sequencing data.
Primer3
Primer design program developed at MIT. Available through web interface, or as download.

The DNA Sequencing Facility is an Abramson Cancer Center Shared Resource that is approved and partially funded by the National Cancer Institute.

abramson-hup

Announcements:
Collection boxes have now been put in the lobby of BRB next to the UPS box and the 1st floor lobby of TRC (near the FEDEX box at the back).  Samples for DNA (Sanger) sequencing can be dropped off into the boxes.  Submission instructions and more information here.


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