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Ipek Oguz, PhD

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Research Associate of Radiology
Research Associate, Department of Radiology, University of Pennsylvania
Department: Radiology

Contact information
University of Pennsylvania
Penn Image Computing Science Lab
3700 Hamilton Walk
6th Floor - Richards Building
Philadelphia, PA 19104
Education:
BS (Computer Engineering)
Middle East Technical University (Ankara), 2000.
MS (Computer Science)
University of North Carolina at Chapel Hill, 2007.
PhD (Computer Science)
University of North Carolina at Chapel Hill, 2009.
Post-Graduate Training
Biomedical Postdoctoral Fellow, Gorman Cardiovascular Research Group and Penn Image Computing and Science Laboratory, 2013-2016.
Biomedical postdoctoral Fellow, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA , 2013-2016.
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Selected Publications

A.M. Pouch, A.H. Aly, A. Lasso, A.V. Nguyen, A.B. Scanlan, F.X. McGowan, G. Fichtinger, R.C. Gorman, J.H. Gorman III, P.A. Yushkevich, M.A. Jolley: Image Segmentation and Modeling of the Pediatric Tricuspid Valve in Hypoplastic Left Heart Syndrome. In: Pop, M. and Wright, G.A. (eds.) FIMH 2017. Lecture Notes in Computer Science 10263: 95-105, 20917.

Guo Zhihui, Kashyap Satyananda, Sonka Milan, Oguz Ipek: Machine learning in a graph framework for subcortical segmentation. Proceedings of SPIE--the International Society for Optical Engineering 10133, Feb 2017.

A.M. Pouch, A.H. Aly, E.K. Lai, N. Yushkevich, R.H. Stoffers, J.H. Gorman III, A.T. Cheung, R.C. Gorman, P.A. Yushkevich: Spatiotemporal segmentation and modeling of the mitral valve in real-time 3D echocardiographic images. International Conference on Medical Image Computing and Computer-Assisted Intervention. Springer, Cham (eds.). Page: 746-753, 2017.

A.M. Pouch, I. Oguz, N. Yushkevich, J.C. Gee, P.A. Yushkevich, N. Schwartz: Novel 3D morphologic analysis of the early placenta using deformable medical modeling (poster presentation). American Journal of Obstetrics and Gynecology 216(1): S136, 2017.

Oguz Ipek, Kashyap Satyananda, Wang Hongzhi, Yushkevich Paul, Sonka Milan: Globally Optimal Label Fusion with Shape Priors. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 9901: 538-546, Oct 2016.

Kashyap Satyananda, Oguz Ipek, Zhang Honghai, Sonka Milan: Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative. Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention 9901: 344-351, Oct 2016.

Oguz Ipek, Cates Josh, Datar Manasi, Paniagua Beatriz, Fletcher Thomas, Vachet Clement, Styner Martin, Whitaker Ross: Entropy-based particle correspondence for shape populations. International journal of computer assisted radiology and surgery 11(7): 1221-32, Jul 2016.

Lee Joohwi, Kim Sun Hyung, Oguz Ipek, Styner Martin: Enhanced Cortical Thickness Measurements for Rodent Brains via Lagrangian-based RK4 Streamline Computation. Proceedings of SPIE--the International Society for Optical Engineering 9784, Feb 2016.

Mumcuoglu, Ipek; Cetin, Feyza; Dogruman Al, Funda; Oguz, Ilkiz; Aksu, Neriman.: Prevalence of microsporidia in healthy individuals and immunocompetent patients with acute and chronic diarrhea. Infectious Diseases 48(2): 133-7, Feb 2016.

E. Obasare, E. Melendres, C. Nwakile, D. Gajanana, S. Samuel, L. Kadem, A.M. Pouch, G. Pressman: Patient specific three-dimensional printing of the calcified mitral valve. (poster presentation) Journal of the American Society of Echocardiography 29(6): B82-B83, 2016.

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Last updated: 10/15/2017
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