Russell Takeshi Shinohara, Ph.D.
Professor of Biostatistics and Epidemiology
Department: Biostatistics and Epidemiology
Graduate Group Affiliations
Contact information
Center for Clinical Epidemiology and Biostatistics
Department of Biostatistics, Epidemiology and Informatics
Perelman School of Medicine
University of Pennsylvania
217 Blockley Hall
423 Guardian Drive
Philadelphia, PA 19104-6021
Department of Biostatistics, Epidemiology and Informatics
Perelman School of Medicine
University of Pennsylvania
217 Blockley Hall
423 Guardian Drive
Philadelphia, PA 19104-6021
Office: 215-746-1090
Fax: 215-573-1050
Fax: 215-573-1050
Email:
rshi@pennmedicine.upenn.edu
rshi@pennmedicine.upenn.edu
Education:
Honors BSc (Probability and Statistics)
McGill University, 2006.
MSc (Mathematics and Statistics)
McGill University, 2007.
PhD (Biostatistics)
The Johns Hopkins University, 2012.
Permanent linkHonors BSc (Probability and Statistics)
McGill University, 2006.
MSc (Mathematics and Statistics)
McGill University, 2007.
PhD (Biostatistics)
The Johns Hopkins University, 2012.
Selected Publications
White, B; Chan, C; Vandekar, S; Shinohara, R: Statistical Approaches to Temporal and Spatial Autocorrelation in Resting-state Functional Connectivity in Mice Measured with Optical Intrinsic Signal Imaging. Neurophotonics 9(4): 041405, Oct 2022 Notes: doi: 10.1117/1.NPh.9.4.041405. Epub 2022 Mar 14.Ganguly, T; Ellis, C; Tu, D; Shinohara, R; Davis, K; Litt, B; Pathmanathan, J: Seizure Detection in Continuous Inpatient EEG: A Comparison of Human vs. Automated Review. Neurology Apr 2022 Notes: doi: 10.1212/WNL.0000000000200267. Online ahead of print.
Bethlehem, R; Seidlitz, J; White, S; Vogel, J; Anderson, K; Adamson, C; Adler, S; Alexopoulos, G; Anagnostou, E; Areces-Gonzalez, A; Astle, D; Auyeung, B; Ayub, M; Ball, G; Baron-Cohen, S; Beare, R; Bedford, S; Benegal, V; Beyer, F; Bi, J; Blangero, J; Bles, M; Boardman, J; Borzage, M; Bosch-Bayard, J; Bourke, N; Calhoun, V; Chakravarty, M; Chen, C; Chertavian, C; Chetelat, G; Chong, Y; Cole, J; Corvin, A; Costantino, M; Courchesne, E; Crivello, F; Cropley, V; Crosbie, J; Crossley, N; Delarue, M; Delorme, R; Desrivieres, S; Devenyi, G; Dolan, R; Donald, K; Donohoe, G; Dunlop, K; Edwards, A; Elison, J; Ellis, C; Elman, J; Eyler, L; Fair, D; Feczko, E; Fletcher, P; Fonagy, P; Franz, C; Galan-Garcia, L; Gholipour, A; Giedd, J; Gilmore, J; Glahn, D; Goodyer, I; Grant, P; Groenewold, N; Gunning, F; Gur, R; Gur, R; Hammill, C; Hansson, O; Hedden, T; Heinz, A; Henson, R; Heuer, K; Hoare, J; Holla, B; Holmes, A; Holt, R; Huang, H; Im, K; Ipser, J; Jac, C; Jackowski, A; Jia, T; Johnson, K; Jones, P; Jones, D; Kahn, R; Karlsson, H; Karlsson, L; Kawashima, R; Kelley, E; Kern, S; Kim, K; Kitzbichler, M; Kremen, W; Lalonde, F; Landeau, B; Lee, S; Lerch, J; Lewis, J, Li, J, Liao, W, Liston, C, Lombardo, M, Lv, J., Lynch, C; Mallard, T; Marcelis, M; Markello, R; Mathias, S; Mazoyer, B; McGuire, P; Meaney, M; Mechelli, A; Medic, N; Misic, B; Morgan, S; Mothersill, D; Nigg, J; Ong, M; Ortinau, C; Ossenkoppele, R; Ouyang, M; Palaniyappan, L; Paly, L; Pan, P; Pantelis, C; Park, M; Paus, T; Pausova, Z; Paz-Linares, D; Piche, A; Pierce, K; Qian, X; Qiu, J; Qiu, A; Raznahan, A; Rittman, T; Rodrigue, A; Rollins, C; Romero-Garcia, R; Ronan, L; Rosenberg, M; Rowitch, D; Salum, G; Satterthwaite, T; Schaare, H; Schachar, R; Schultz, A; Schumann, G Schöll, M; Sharp, D; Shinohara, R; Skoog, I; Smyser, C; Sperling, R; Stein, D; Stolicyn, A; Suckling, J; Sullivan, G; Taki, Y; Thyreau, B; Toro, R; Traut, N; Tsvetanov, K; Turk-Browne, N; Tuulari, J; Tzourio, C; Vachon-Presseau, É; Valdes-Sosa, M; Valdes-Sosa, P; Valk, S; va, T; Vandekar, S; Vasung, L; Victoria, L; Villeneuve, S; Villringer, A; Vértes, P; Wagstyl, K; Wang, Y; Warfield, S; Warrier, V; Westman, E; Westwater, M; Whalley, H; Witte, A; Yang, N; Yeo, B; Yun, H; Zalesky, A; Zar, H; Zettergren, A; Zhou, J; Ziauddeen, H; Zugman, A; Zuo, X: Brain Charts for the Human Lifespan Nature 604(7906): 525-533, Apr 2022 Notes: doi: 10.1038/s41586-022-04554-y. Epub 2022 Apr 6.
Jakimovski, D; Zivadinov, R; Bergsland, N; Oh, J; Martin, M; Shinohara, R; Bakshi, R; Calabresi, P; Papinutto, N; Pelletier, D; Dwyer, M: Multi-site MRI reproducibility of lateral ventricular volume using the NAIMS cooperative pilot dataset. Journal of Neuroimaging Apr 2022 Notes: doi: 10.1111/jon.12998. Online ahead of print.
Chen, A; Srinivasan, D; Pomponio, R; Fan, Y; Nasrallah, I; Resnick, S; Beason-Held, L; Davatzikos, C; Satterthwaite, T; Bassett, D; Shinohara, R; Shou, H: Harmonizing Functional Connectivity Reduces Scanner Effects in Community Detection. NeuroImage Apr 2022 Notes: doi: https://doi.org/10.1101/2021.12.03.469269.
Chand, G; Singhal, P; Dwyer, D; Wen, J; Erus, G; Doshi, J; Srinivasan, D; Mamourian, E; Varol, E; Sotiras, A; Hwang, G; Dazzan, P; Kahn, R; Schnack, H; Zanetti, M; Meisenzahl, E; Busatto, G; Crespo-Facorro, B; Pantelis, C; Wood, S; Zhuo, C; Shinohara, R; Shou, H; Fan, Y; Koutsouleris, N; Kaczkurkin, A; Moore, T; Verma, A Calkins ME, Gur RE, Gur RC, Ritchie MD, Satterthwaite TD, Wolf DH, Davatzikos C.: Schizophrenia Imaging Signatures and Their Associations With Cognition, Psychopathology, and Genetics in the General Population. Am J Psychiatry Apr 2022 Notes: doi: 10.1176/appi.ajp.21070686. Online ahead of print.
Chen, A; Luo, C; Chen, Y; Shinohara, R; Shou, H: Privacy-preserving Harmonization via Distributed ComBat. NeuroImage(248), 118822, Mar 2022 Notes: doi: 10.1016/j.neuroimage.2021.118822. Epub 2021 Dec 25.
Chen, A; Beer, J; Tustison, N; Cook, P; Shinohara, R; Shou, H: Mitigating Site Effects in Covariance for Machine Learning in Neuroimaging Data. Human Brain Mapping 43(4): 1179-1195, Mar 2022 Notes: doi: 10.1002/hbm.25688. Epub 2021 Dec 14.
Baller, E; Valcarcel, A; Adebimpe, A; Alexander-Bloch, A; Cui, Z; Gur, R; Gur, R; Larsen, B; Linn, K; O'Donnell, C; Pines, A; Raznahan, A; Roalf, D; Sydney, V; Tapera, T; Tisdall, M; Vandekar, S; Xia, C; Detre, J; Shinohara, R; Satterthwaite, T: Developmental Coupling of Cerebral Blood Flow and fMRI Fluctuations in Youth. Cell Reports 38(13): 110576, Mar 2022 Notes: DOI: 10.1016/j.celrep.2022.110576.
Horng, H; Singh, A; Yousefi, B; Cohen, E; Haghighi, B; Katz, S; Noel, P; Shinohara, R; Kontos, D: Generalized ComBat Harmonization Methods for Radiomic Features with Multi-modal Distributions and Multiple Batch Effects. Scientific Reports 12(1): 4493, Mar 2022 Notes: DOI: 10.1038/s41598-022-08412-9.