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Selected Publications
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Aldeia GSI, Romano JD, de Franca FO, Herman DS, & La Cava WG: Towards symbolic regression for interpretable clinical decision scores. Philosophical Transactions A 384(2317): 20240588, April 2026.
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Abdurezak N, Pan IT, Sacksith K, Apostolidis S, & Romano JD: Defining an Electronic Health Record-Based Phenotyping Algorithm for Immune-Related Adverse Events. 2026 Penn Colton Center for Autoimmunity Symposium April 2026.
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Rajagopalan A, Nguyen TA, Guare LA, Garao Rico AL, Venkatesh R, Caruth L, Regeneron Genetics Center, Penn Medicine BioBank, Verma A, Ritchie MD, Hall MA, Setia-Verma S, & Romano JD: DRIVE-KG: Enhancing variant-phenotype association discovery in understudied complex diseases using heterogeneous knowledge graphs. 2026 Pacific Symposium on Biocomputing 2026, Jan 2026 Notes: (Accepted; In-press. Drs. Romano and Setia-Verma are co-corresponding/co-senior authors on this publication.).
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Kumar R, Romano JD, & Ritchie MD: Learnable Protein Representations in Computational Biology for Predicting Drug-Target Affinity. Journal of Cheminformatics 2026 Notes: (accepted; published online ahead of print).
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Nguyen TA, Su W, Rajagopalan A, Abdurezak N, Hewryk OSI, & Romano JD: Clinical Knowledge Representation in Data Science. Annual Review of Biomedical Data Science 2026 Notes: (accepted; in-press).
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Hewryk OSI & Romano JD: A Phyto-Ontology for Integrative Therapeutic Discovery. Lecture Notes in Artificial Intelligence 2026 Notes: (accepted, in-press).
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Andemariam B, Torres K, & Romano JD: Explainable AI-based prediction of chronic kidney disease as a long-term outcome of sickle cell disease in a large, multi-site observational data cohort. Blood 146(Supplement 1): 2967, November 2025.
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Kumar R, Romano JD, & Ritchie MD: CASTER-DTA: Equivariant Graph Neural Networks for Predicting Drug-Target Affinity. Briefings in Bioinformatics 26(5): bbaf554, September 2025.
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Kumar R, Romano JD, & Ritchie MD: Network-based analyses of multiomics data in biomedicine. BioData Mining 18: 37, May 2025 Notes: (accepted; in-press).
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Romano JD: Ista: An Ontology-Driven Toolkit for Biomedical Knowledge Base Assembly. Studies in Health Technology and Informatics May 2025 Notes: Accepted; in-press.
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Last updated: 04/24/2026
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