Resources
Databases
NIAGADS Genomics Database: Genomic database and a comprehensive suite of analysis tools
DASHR: Human non-coding RNA database. Publication.
Data sets
Human brain data GSE43335 Download page/GEO. Publication.
Processed smRNA-seq data for DASHR Download page.
Single cell data Website.
Mouse RNA-seq Download page/GEO. Publication.
ADSP. Alzheimer's Disease Sequencing Project. Apply through dbGaP.
ADGC. Alzheimer's Disease Genetic Consortium, GWAS dataset for >30,000 subjects. Apply through NIAGADS.
Software
CoRAL Suite of tools for classification and annotation of non-coding RNAs
Software. Publication.
SAVoR RNA secondary structure annotation
Website. Publication.
HAMR Identification of RNA modifications from RNA-Seq data
Website. Publication.
HIPPIE Suite of tools for identifying regulatory interactions from Hi-C data
Website. Software. Publication
DRAW & SneakPeek Suite of tools for whole-genome and whole-exome DNA-seq data analysis
Website. Publication.