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Department of Pharmacology
Education:
Research Summary:
Research in the Blair laboratory is heavily involved in the use of mass spectrometry for proteomics and DNA analysis.
Oxidative stress, carcinogenesis, and cardiovascular disease
The reactive oxygen species superoxide, peroxide, and hydroxyl radical, are generated constantly in vivo from ground state triplet oxygen. This occurs by a variety of endogenous processes including, normal mitochondrial aerobic respiration, phagocytosis of bacteria or virus-containing cells, and peroxisomal-mediated degradation of fatty acids. Catechols, which arise in vivo through the metabolism of drugs, environmental chemicals, and endogenous hormones, generate reactive oxygen species through redox cycling. The reactive oxygen species are normally detoxified by antioxidant defense systems such as, superoxide dismutase, catalase, reduced glutathione (GSH)-dependent peroxidases, and thioredoxin. Some of the reactive oxygen species are able to escape these defenses in order to perform important metabolic roles. This means that there is always a potential for damage to lipids and macromolecules such as proteins, peptides, and DNA, particularly in settings of oxidative stress. Lipid damage involves the formation of lipid hydroperoxides, which undergo homolytic decomposition to the aldehydic genotoxins, 4-oxo-2-nonenal, 4,5-epoxy-2(E)-decenal, and 4-hydroxy-2-nonenal through two quite distinct pathways. We have shown that one pathway involves a complex rearrangement of the alkoxy radical derived from the lipid hydroperoxide and the other pathway involves the intermediate formation of another potential genotoxin, 4-hydroperoxy-2-nonenal. Lipid hydroperoxides can also be derived from the action of lipoxygenases and cyclooxygenases on polyunsaturated fatty acids. 4,5-Epoxy-2(E)-decenal forms the unsubstituted etheno-2-deoxyadenosine adduct with DNA, a mutagenic lesion which as been observed in human tissue DNA samples. Several new ethano- and etheno-DNA-adducts have been identified from the reaction of 4-oxo-2-nonenal with DNA. However, nothing is known about how these lesions affect proliferation or apoptosis. A role for 4-oxo-2-nonenal in the covalent modifications of proteins is also possible. 4-Hydroxy-2-nonenal forms propano adducts with 2'-deoxyguansine and also up-regulates cyclooxygenase-2 expression. As cyclooxygenase-2 converts arachidonic acid into lipid hydroperoxides, this provides a potential mechanism for increased production of genotoxic bifunctional electrophiles. Our laboratory is involved in determining the factors that control oxidative stress-mediated damage to proteins, peptides and DNA. We are quantifying these modified proteins, peptides, and DNA together with selected endogenous metabolites using novel mass spectrometry methodology to act as biomarkers for assessing whether such processes occur in cardiovascular disease and cancer. We are also determining whether their formation can be prevented using novel pharmacological agents.
Department of Pharmacology
Ian A. Blair, Ph.D.
Education:| 1968 | BSc (Chemistry) | University of London |
| 1968 | ARCS | Royal College of Science |
| 1971 | DIC | Imperial College of Science and Technology |
| 1971 | Ph.D. (Organic Chemistry) |
University of London
(Advisor, Nobel Laureate Sir Derek HR Barton) |
| 1997 | MA (Honorary) | University of Pennsylvania |
Research in the Blair laboratory is heavily involved in the use of mass spectrometry for proteomics and DNA analysis.
Oxidative stress, carcinogenesis, and cardiovascular disease
The reactive oxygen species superoxide, peroxide, and hydroxyl radical, are generated constantly in vivo from ground state triplet oxygen. This occurs by a variety of endogenous processes including, normal mitochondrial aerobic respiration, phagocytosis of bacteria or virus-containing cells, and peroxisomal-mediated degradation of fatty acids. Catechols, which arise in vivo through the metabolism of drugs, environmental chemicals, and endogenous hormones, generate reactive oxygen species through redox cycling. The reactive oxygen species are normally detoxified by antioxidant defense systems such as, superoxide dismutase, catalase, reduced glutathione (GSH)-dependent peroxidases, and thioredoxin. Some of the reactive oxygen species are able to escape these defenses in order to perform important metabolic roles. This means that there is always a potential for damage to lipids and macromolecules such as proteins, peptides, and DNA, particularly in settings of oxidative stress. Lipid damage involves the formation of lipid hydroperoxides, which undergo homolytic decomposition to the aldehydic genotoxins, 4-oxo-2-nonenal, 4,5-epoxy-2(E)-decenal, and 4-hydroxy-2-nonenal through two quite distinct pathways. We have shown that one pathway involves a complex rearrangement of the alkoxy radical derived from the lipid hydroperoxide and the other pathway involves the intermediate formation of another potential genotoxin, 4-hydroperoxy-2-nonenal. Lipid hydroperoxides can also be derived from the action of lipoxygenases and cyclooxygenases on polyunsaturated fatty acids. 4,5-Epoxy-2(E)-decenal forms the unsubstituted etheno-2-deoxyadenosine adduct with DNA, a mutagenic lesion which as been observed in human tissue DNA samples. Several new ethano- and etheno-DNA-adducts have been identified from the reaction of 4-oxo-2-nonenal with DNA. However, nothing is known about how these lesions affect proliferation or apoptosis. A role for 4-oxo-2-nonenal in the covalent modifications of proteins is also possible. 4-Hydroxy-2-nonenal forms propano adducts with 2'-deoxyguansine and also up-regulates cyclooxygenase-2 expression. As cyclooxygenase-2 converts arachidonic acid into lipid hydroperoxides, this provides a potential mechanism for increased production of genotoxic bifunctional electrophiles. Our laboratory is involved in determining the factors that control oxidative stress-mediated damage to proteins, peptides and DNA. We are quantifying these modified proteins, peptides, and DNA together with selected endogenous metabolites using novel mass spectrometry methodology to act as biomarkers for assessing whether such processes occur in cardiovascular disease and cancer. We are also determining whether their formation can be prevented using novel pharmacological agents.
Selected Key Publications (from 242):
2009
- Jian W, Lee SH, Williams MV, Blair IA. (2009) 5-Lipoxygenase-mediated Endogenous DNA Damage. J Biol Chem 284(25):16799-807.
- Wei C, Zhu P, Shah SJ, Blair IA. 15-Oxo-Eicosatetraenoic Acid, a Metabolite of Macrophage 15-Hydroxyprostaglandin Dehydrogenase that Inhibits Endothelial Cell Proliferation. Mol Pharmacol. 2009 Jun 17. [Epub ahead of print]
- Mangal D, Vudathala D, Park JH, Lee SH, Penning TM, Blair IA. (2009) Analysis of 7,8-Dihydro-8-oxo-2'-deoxy guanosine in Cellular DNA during Oxidative Stress. Chem Res Toxicol. 22(5):788-797. PMCID: PMC2684441
- Shah SJ, Yu KH, Sangar V, Parry SI, Blair IA. (2009) Identification and Quantification of Preterm Birth Biomarkers in Human Cervicovaginal Fluid by Liquid Chromatography/Tandem Mass Spectrometry. J Proteome Res.. 8(5):2407-2417.
- Mesaros, C., Lee, S. H., and Blair, I. A. (2009) Targeted quantitative analysis of eicosanoid lipids in biological samples using liquid chromatography-tandem mass spectrometry. J. Chromatogr. B Mar 17 [Epub ahead of print];
- Yu, KH, Barry CG, Austin D, Busch C.M, Sangar V, Rustgi A.K, Blair I.A. Stable isotope dilution multidimensional liquid chromatography-tandem mass spectrometry for pancreatic cancer serum biomarker discovery. J Proteome Res 8(3):1565-1576. PMCID: PMC2652408
- Ciccimaro E, Hanks SK, Blair IA. (2009) Quantification of Focal Adhesion Kinase Activation Loop Phosphorylation as a Biomarker of Src Activity. Mol Pharmacol. 75(3):658-66
- Hahn CG, Banerjee A, Macdonald ML, Cho DS, Kamins J, Nie Z, Borgmann-Winter KE, Grosser T, Pizarro A, Ciccimaro E, Arnold SE, Wang HY, Blair IA. (2009) The post-synaptic density of human postmortem brain tissues: an experimental study paradigm for neuropsychiatric illnesses. PLoS One. 2009;4(4):e5251. PMCID: PMC2666803
2008
- Huang Y., Khartulyari S., Morales M.E., Stanislawska-Sachadyn A., Von Feldt J.M., Whitehead A.S., Blair I.A. (2008) Quantification of key red blood cell folates from subjects with defined MTHFR 677C>T genotypes using stable isotope dilution liquid chromatography/mass spectrometry. Rapid Commun Mass Spectrom. 22(16):2403-12.
- Blair, IA. DNA-adducts with lipid peroxidation products. J Biol Chem. 2008 283(23):15545-9. PMID: 18285329.
- Park J.H., Mangal D., Tacka K.A., Quinn A.M., Harvey R.G., Blair I.A., Penning T.M. (2008) Evidence for the aldo-keto reductase pathway of polycyclic aromatic trans-dihydrodiol activation in human lung A549 cells. Proc Natl Acad Sci USA 105(19):6846-51. PMCID: PMC2383938
- Zhu P, Oe T, and Blair IA. (2008) Determination of cellular redox status by stable isotope dilution liquid chromatography/mass spectrometry analysis of glutathione and glutathione disulfide. Rapid Commun Mass Spectrom. 22: 432-440.
| • | Norfolk County Major Award (1965-1968) |
| • | Fritzsche D. and O. Scholar (1968-1971) |
| • | Royal Society of Chemistry Perkin Award (1980) |
| • | Royal Society of Chemistry Traveling Fellowship (1982) |
| • | Chair, Section on Quantitative Analysis American Society for Mass Spectrometry (1985-1987) |
| • | Ad hoc Reviewer: NIH Metallobiochemistry Study Section (1990-present) |
| • | Ad hoc Reviewer: NIH Special Study Section Pharmacological Sciences Program (1990-present) |
| • | Visiting Professorship, University of Kanazawa, Kanazawa, Japan (1991) |
| • | NIH Metallobiochemistry Study Section (1992-1996) |
| • | Ad hoc Reviewer, Metallobiochemistry Study Section (1998-1999) |
| • | Ad hoc Reviewer, Division of Research Resources (1998-1999) |
| • | John Gilbert Memorial Lecture, Merck, West Point, PA (2000) |
| • | Ad hoc Reviewer, Bioanalytical Eng. & Chem. Review Panel (2001) |
| • | Ad hoc Reviewer, NCI and NHLBI Special Review Committees (2002) |
| • | Ad hoc Reviewer, NCI and NHLBI Special Review Committees (2003) |
| • | RCM Beynon Prize (2005) |
| • | Fellow of the American Association for the Advancement of Science in year (2005) |
| • | University of Pennsylvania Dean's Award for Excellence in Graduate Student Training (2006) |
| • | Fellow, American Association of Pharmaceutical Scientists (2006) |
| • | Member at Large for the Pharmaceutical Section of the American Association for the Advancement of Science (2007) |
| • | American Society for Mass Spec Program Committee (1998-2000) |
| • | Journal of Mass Spectrometry (1999-present) |
| • | Current Drug Metabolism (1999-present) |
| • | Chemical Research in Toxicology (2001-present) |
| • | Journal of Biological Chemistry (2006-2011) |
| • | Associate Editor of the journal Prostaglandins and other Lipid Mediators (2007) |
| Jasbir S. Arora, PhD Research Associate jasbira@mail.med.upenn.edu |
Vineet Sangar, PhD Postdoctoral Fellow vsangar@mail.med.upenn.edu |
Sankha “Bobby” Basu, B.S. |
Sumit Shah, PhD |
| Showket Bhat, PhD Postdoctoral Fellow showket@mail.med.upenn.edu |
Arnaldo J, PhD Postdoctoral Fellow diaza@mail.med.upenn.edu |
| Stacy Gelhaus, Ph.D. NRSA Fellow gstacy@mail.med.upenn.edu |
Angela Wehr, B.S. Graduate Student wehr@mail.med.upenn.edu |
| Stacy Gelhaus, Ph.D. NRSA Fellow gstacy@mail.med.upenn.edu |
Cong Wei, M.S. Graduate Student congwei@mail.med.upenn.edu |
| Xiaojiang Liu, B.S. Graduate Student liuxiaoj@sas.upenn.edu |
Kenneth Yu, M.D. Hem/Onc Instructor kyu2@mail.med.upenn.edu |
| Matthew MacDonald, B.S. Graduate Student macdonl@mail.med.upenn.edu |
JunFeng Xiao, Ph.D. Postdoctoral Fellow |
| Marissa R. Martinez, B.S. Graduate Student rmarissa@mail.med.upenn.edu |
Suhong Zhang, Ph.D. Postdoctoral Fellow |
| Clementina Mesaros, Ph.D. Research Associate mesaros@mail.med.upenn.edu |
|
| Kannan Rangiah, Ph.D. Postdoctoral Fellow rkannan@mail.med.upenn.edu |
Center for Cancer Pharmacology
841-850 Biomedical Research Building II/III
University of Pennsylvania School of Medicine
421 Curie Boulevard
Philadelphia, PA 19104-6160
Lab Telephone: 215-573-9878, 2528 Lab Fax: 215-573-9889 Links: http://www.itmat.upenn.edu
http://www.med.upenn.edu/ccp/
http://www.med.upenn.edu/ccp/blair_lab/
http://www.sas.upenn.edu/chem/


