Faculty

Russell Takeshi Shinohara, Ph.D.

faculty photo
Associate Professor of Biostatistics in Biostatistics and Epidemiology
Department: Biostatistics and Epidemiology
Graduate Group Affiliations

Contact information
Center for Clinical Epidemiology and Biostatistics
Department of Biostatistics, Epidemiology and Informatics
Perelman School of Medicine
University of Pennsylvania
217 Blockley Hall
423 Guardian Drive
Philadelphia, PA 19104-6021
Office: 215-746-1090
Fax: 215-573-1050
Education:
Honors BSc (Probability and Statistics)
McGill University, 2006.
MSc (Mathematics and Statistics)
McGill University, 2007.
PhD (Biostatistics)
The Johns Hopkins University, 2012.
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Selected Publications

Xia, H., Ma, Z., Cui, Z., Bzdok, D., Thirion, B., Bassett, D.S., Satterthwaite, T.D., Shinohara, R.T., Witten, D. : Multi-Scale Network Regression via Penalized Multivariate Connectivity Analysis. Human Brain Mapping 41(10): 2553-2566, Jul 2020 Notes: doi: 10.1002/hbm.24982. Epub 2020 Mar 26.

Dworkin, J.D., Linn, K.A., Teich, E.G., Zurn, P., Shinohara, R.T., Bassett, D.S. : The Extent and Drivers of Gender Imbalance in Neuroscience Reference Lists. Nature Neuroscience Jun 2020 Notes: doi: 10.1038/s41593-020-0658-y. Online ahead of print.

Pines, A.R., Cieslak, M., Larsen, B., Baum, G.L., Cook, P.A., Adebimpe, A., Davila, D.G., Elliott, M., Jirsaraie, R., Murtha, K., Oathes, D., Piiwaa, K., Rosen, A.F.G., Rush, S., Shinohara, R.T., Bassett, D.S., Roalf, D.R., Satterthwaite, T.D.: Leveraging Multi-shell Diffusion for Studies of Brain Development in Youth and Young Adulthood. Developmental Cognitive Neuroscience 43: 100788, Jun 2020 Notes: doi: 10.1016/j.dcn.2020.100788. Epub 2020 Apr 22.

Forde, N., Jeyachandra, J., Joseph, M., Jacobs, G., Dickie, E., Satterthwaite, T.D., Shinohara, R.T., Ameis, S.H., Voineskos, A.N. : Sex differences in Variability of Brain Structure Across the Lifespan. Cerebral Cortex bhaa123, Jun 2020 Notes: doi: 10.1093/cercor/bhaa123. Online ahead of print.

Cornblath, E., Ashourvan, A., Kim, J.Z., Betzel, R.F., Ciric, R., Baum, G.L., Ruparel, K., Moore, T.M., Gur, R.C., Gur, R.E., Shinohara, R.T., Roalf, D.R., Satterthwaite, T.D., and Bassett, D.S. : Temporal Sequences of Brain Activity at Rest are Constrained by White Matter Structure and Modulated by Cognitive Demands. Communications Biology 3(1): 261, May 2020 Notes: doi: 10.1038/s42003-020-0961-x.

Radua, J., Vieta, E., Shinohara, R.T., Kochunov, P., Quide, Y, Green, M., Weickert, C., Weickert, T., Bruggemann, J., Kircher, T., Nenadic, I., Cairns, M., Seal, M., Schall, U., Henskens, F., Fullerton, J., Mowry, B., Pantelis, C., Lenroot, R., Cropley, V., Loughland, C., Scott, R., Wolf, D., Satterthwaite, T.D., Tan, Y., Sim, K., Piras, F., Spalletta, G., Banaj, N., Pomarol-Clotet, E., Solanes, A., Albajes-Eizagirre, A., Canales-Rodrigues, E., Sarro, S., Di Giorgio, A., Bertolino, A., Stablein, M., Oertel, V., Knochel, C., Borgwardt, S., du Plessis, S., Yun, J., Kwon, J.S., Dannlowski, U., Hahn, T., Grotegerd, D., Alloza, C., Arango, C., Janssen, J., Diaz-Caneja, C., Jiang, W., Calhoun, V., Ehrlich, S., Yang, K., Cascella, N., Takayanagi, Y., Sawa, A., Tomychev, A., Lebedeva, I., Kaleda, V., Kirschner, M., Hoschl, C., Tomecek, D., Skoch, A., van Amelsvoort, T., Bakker, G., James, A., Preda, A., Weideman, A., Stein, D., Howells, G., Uhlmann, A., Temmingh, H., Lopez-Jaramillo, C., Diaz-Zuluaga, A., Lydia, F., Martines-Heras, E., Solana, E., Llufriu, S., ENIGMA Consortium; ENIGMA Consortium collaborators. : Increased Power by Harmonizing Structural MRI Site Differences with the ComBat Batch Adjustment Method in ENIGMA NeuroImage Page: 116956, May 2020 Notes: doi: 10.1016/j.neuroimage.2020.116956. Online ahead of print.

Carass A., Roy S., Gherman A., Reinhold J.C., Jesson A., Arbel T., Maier O., Handels H., Ghafoorian M., Platel B., Birenbaum A., Greenspan H., Pham D.L., Crainiceanu C.M., Calabresi P.A., Prince J.L., Roncal W.R.G., Shinohara R.T., Oguz I. : Evaluating White Matter Lesion Segmentations with Refined Sørensen-Dice Analysis. Scientific Reports 10(1): 8242, May 2020 Notes: doi: 10.1038/s41598-020-64803-w.

Valcarcel, A.M., Muschelli, J., Pham, D.L., Martin, M.L., Yushkevich, P.A., Brandstadter, R., Patterson, K.R., Schindler, M.K., Calabresi, P.A., Bakshi, R., Shinohara, R.T. : TAPAS: A Thresholding Approach for Probability Map Automatic Segmentation in Multiple Sclerosis NeuroImage: Clinical 27: 102256, May 2020 Notes: doi: 10.1016/j.nicl.2020.102256. Online ahead of print.

Conrad, E.C., Bernabei, J.M., Kini, L.G., Shah, P., Mikhail, F., Kheder, A., Shinohara, R.T., Davis, K.A., Bassett, D.S., Litt, B. : The Sensitivity of Network Statistics to Incomplete Electrode Sampling on Intracranial EEG. Network Neuroscience 4(2): 484-506, May 2020 Notes: doi: 10.1162/netn_a_00131. eCollection 2020.

Bagnato, F., Gauthier, S.A., Laule, C., Moore, G.R.W., Bove, R., Cai, Z., Cohen‐Adad, J., Harrison, D.M., Klawiter, E.C., Morrow, S.A., Öz, G., Rooney, W.D., Smith, S.A., Calabresi, P.A., Henry, R.G., Oh, J., Ontaneda, D., Pelletier, D., Reich, D.S., Shinohara, R.T.: Imaging Mechanisms of Disease Progression in Multiple Sclerosis: Beyond Brain Atrophy. Journal of Neuroimaging 30(3): 251-266, May 2020 Notes: DOI: 10.1111/jon.12700.

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Last updated: 07/01/2020
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