James C. Gee

faculty photo
Associate Professor of Radiologic Science in Radiology
Director, Penn Image Computing and Science Laboratory, Department of Radiology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA
Co-Director, Translational Biomedical Imaging Center, Institute of Translational Medicine and Therapeutics, University of Pennsylvania, Philadelphia, PA
Director, HHMI-NIBIB Interfaces Program in Biomedical Imaging and Informational Sciences, University of Pennsylvania, Philadelphia, PA
Director, Center for Information Driven Radiology, University of Pennsylvania, Philadelphia, PA
Director, Univ of Elec Sci and Tech of China - Univ of Penna Institute for Digital Health Innovation, Univ of Elec Sci and Techof China, Chengdu, CN
Department: Radiology

Contact information
Richards - 6th Floor
3700 Hamilton Walk
Philadelphia, PA 19104-6116
Office: 215-746-6295
Education:
B.S. (Electrical Engineering)
University of Washington, 1987.
B.S. (Computer Science)
University of Washington, 1987.
M.S. (Electrical Engineering)
University of Washington, 1989.
Ph.D. (Computer and Information Science)
University of Pennsylvania, 1996.
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Description of Itmat Expertise

Dr. Gee's major area of interest is biomedical image analysis and computing, with active research in all of the quantitative methods represented, including segmentation, registration, morphometry and shape statistics, as applied to a variety of organ systems and all of the major and emerging modalities in biological/biomaterials imaging and in vivo medical imaging.

Selected Publications

Cereda Maurizio, Xin Yi, Hamedani Hooman, Bellani Giacomo, Kadlecek Stephen, Clapp Justin, Guerra Luca, Meeder Natalie, Rajaei Jennia, Tustison Nicholas J, Gee James C, Kavanagh Brian P, Rizi Rahim R: Tidal changes on CT and progression of ARDS. Thorax Jun 2017.

O╩╝Sullivan Ryan, Tom Lisa M, Bunya Vatinee Y, Nyberg William C, Massaro-Giordano Mina, Daniel Ebenezer, Smith Eli, Brainard David H, Gee James, Maguire Maureen G, Stone Richard A: Use of Crossed Polarizers to Enhance Images of the Eyelids. Cornea 36(5): 631-635, May 2017.

Zheng Yuanjie, Wang Yu, Jiao Wanzhen, Hou Sujuan, Ren Yanju, Qin Maoling, Hou Dewen, Luo Chao, Wang Hong, Gee James, Zhao Bojun: Joint alignment of multispectral images via semidefinite programming. Biomedical optics express 8(2): 890-901, Feb 2017.

Lawson Gwendolyn M, Camins Joshua S, Wisse Laura, Wu Jue, Duda Jeffrey T, Cook Philip A, Gee James C, Farah Martha J: Childhood socioeconomic status and childhood maltreatment: Distinct associations with brain structure. PloS one 12(4): e0175690, 2017.

He Yunlong, Zheng Yuanjie, Zhao Yanna, Ren Yanju, Lian Jian, Gee James: Retinal Image Denoising via Bilateral Filter with a Spatial Kernel of Optimally Oriented Line Spread Function. Computational and mathematical methods in medicine 2017: 1769834, 2017.

Chen Min, Cooper Robert F, Han Grace K, Gee James, Brainard David H, Morgan Jessica I W: Multi-modal automatic montaging of adaptive optics retinal images. Biomedical optics express 7(12): 4899-4918, Dec 2016.

Babiloni Fabio, Gee James C: The Power of Connecting Dots: Advanced Techniques to Evaluate Brain Functional Connectivity in Humans. IEEE transactions on bio-medical engineering 63(12): 2447-2449, Oct 2016.

Olm Christopher A, Kandel Benjamin M, Avants Brian B, Detre John A, Gee James C, Grossman Murray, McMillan Corey T: Arterial spin labeling perfusion predicts longitudinal decline in semantic variant primary progressive aphasia. Journal of neurology 263(10): 1927-38, Oct 2016.

Lin Jianwei, Zheng Yuanjie, Jiao Wanzhen, Zhao Bojun, Zhang Shaoting, Gee James, Xiao Rui: Groupwise registration of sequential images from multispectral imaging (MSI) of the retina and choroid. Optics express 24(22): 25277-25290, Oct 2016.

Showalter Brent L, DeLucca John F, Peloquin John M, Cortes Daniel H, Yoder Jonathon H, Jacobs Nathan T, Wright Alexander C, Gee James C, Vresilovic Edward J, Elliott Dawn M: Novel human intervertebral disc strain template to quantify regional three-dimensional strains in a population and compare to internal strains predicted by a finite element model. Journal of orthopaedic research : official publication of the Orthopaedic Research Society 34(7): 1264-73, Jul 2016.

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Last updated: 10/26/2017
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