Russell Takeshi Shinohara

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Assistant Professor of Biostatistics in Biostatistics and Epidemiology
Senior Scholar, Center for Clinical Epidemiology and Biostatistics, University of Pennsylvania Perelman School of Medicine
Affiliated Faculty, Center for Neuromodulation in Depression and Stress (CNDS), Department of Psychiatry, University of Pennsylvania Perelman School of Medicine
Affiliated Faculty , Center for Biomedical Imaging Computing and Analytics (CBICA), University of Pennsylvania Perelman School of Medicine
Full Member , Institute for Translational Medicine and Therapeutics (ITMAT), University of Pennsylvania Perelman School of Medicine
Senior Fellow, Institute for Biomedical Informatics (IBI), University of Pennsylvania Perelman School of Medicine
Department: Biostatistics and Epidemiology

Contact information
Center for Clinical Epidemiology and Biostatistics
Department of Biostatistics, Epidemiology and Informatics
Perelman School of Medicine
University of Pennsylvania
514 Blockley Hall
423 Guardian Drive
Philadelphia, PA 19104-6021
Office: 215-746-1090
Fax: 215-573-1050
Graduate Group Affiliations
Honors BSc (Probability and Statistics)
McGill University, 2006.
MSc (Mathematics and Statistics)
McGill University, 2007.
PhD (Biostatistics)
The Johns Hopkins University, 2012.
Permanent link

Description of Itmat Expertise

Biostatistics, Imaging Statistics, Biomedical Imaging, Neuroimaging, Magnetic Resonance Imaging

Selected Publications

Roalf, D.R., Schmidtt, J.E., Vandekar, S.N., Satterthwaite, T.D., Shinohara, R.T., Ruparel, K., Elliott, M.A., Prabhakaran, K., McDonald-McGinn, D.M., Zackai, E.H., Gur, R.C., Emanuel, B.S., and Gur, R.E. : Diminished Cortical Thickness is Associated with Impulsive Choice in Adolescence. Journal of Neuroscience 2018 Notes: In press.

Xie, L., Shinohara, R.T., Ittyerah, R., Kuijf, H.J., Pluta, J.B., Blom, K., Javari, M., Kooistra, M., Reijmer, Y.D., Koek, H.L., Zwanenburg, J.J.M., Wang, H., Luijten, P., Geerlings, M.I., Das, S.R., Biessels, G.J., Wolk, D.A., Yushkevich, P.A., Wisse, L.E.M. : Automated multi-atlas segmentation of hippocampal and extrahippocampal subregions in Alzheimer's disease at 3T and 7T: what atlas composition works best? Journal of Alzheimer's Disease 2018 Notes: In press.

Valcarcel, A., Linn, K.A., Vandekar, S.N., Satterthwaite, T.D., Muschelli, J., Calabresi, P.A., Pham, D.L., Martin, M.L., and Shinohara, R.T.: MIMoSA: An Automated Method for Inter-Modal Segmentation Analysis of Multiple Sclerosis Brain Lesions. Journal of Neuroimaging 2018 Notes: In press.

Dworkin, J.D., Linn, K.A., Oguz, I., Fleishman, G.M., Bakshi, R., Nair G., Calabresi, P.A., Henry, R.G., Oh, J., Papinutto, N., Pelletier, D., Rooney, W., Stern, W., Sicotte, N.L., Reich, D.S., Shinohara, R.T., and the NAIMS Cooperative : An automated statistical technique for counting distinct multiple sclerosis lesions. American Journal of Neuroradiology 2018 Notes: In press.

Vandekar, S., Reiss, P.T. and Shinohara, R.T.: Interpretable high-dimensional inference via score maximization with an application in neuroimaging. Journal of the American Statistical Association: Theory and Methods 2018 Notes: In press.

Rosen, A., Roalf, D.R., Ruparel, K., Blake, J., Seelaus, K., Villa, P., Cook, P.A., Elliott, M.A., Schmitt, J.E., Shinohara, R.T., Tisdall, D., Craddock, C., Gur, R.E., Gur, R.C., and Satterthwaite, T.D.: Data-driven Assessment of Structural Image Quality NeuroImage Dec 2017 Notes: epub ahead of print DOI: 10.1016.

Shah, P., Bassett, D.S., Wisse, L.E.M., Detre, J.A., Stein, J.M., Yushkevich, P.A., Shinohara, R.T., Pluta, J.B., Daffner, M., Wolk, D.A., Elliott, M.A., Litt, B., Davis, K.A., Das, S.R.: Mapping the structural and functional network architecture of the medial temporal lobe using 7T MRI. Human Brain Mapping 00: 1-15, Nov 2017.

Fortin, J.P., Cullen, N., Sheline, Y.I., Taylor, W.D., Aselcioglu, I., Adams, P., Cooper, C., Fava, M., McGrath, P.J., McInnis, M., Parsey, R.V., Phillips, M.J., Trivedi, M.H., Weissman, M.M., and Shinohara, R.T. : Harmonization of cortical thickness measurements across scanners and sites. NeuroImage 167: 104-120, November 2017.

Hazra, A., Reich, B.J., Reich, D.S., Shinohara, R.T., Staicu, A.M.: A spatio-temporal model for longitudinal image-on-image regression. Statistics in Biosciences Page: 1-25, Oct 2017 Notes: DOI: 10.1007/s12561-017-9206-z.

O’Byrne, M., Shinohara, R.T., Grant, E.K., Kanter, J.P., Gillespie, M.J., Dori, Y., Rome, J.J., Glatz, A.C.: Increasing Propensity to Pursue Operative Closure of Atrial Septal Defects Following Changes in the Instructions for Use of the Amplatzer Septal Occluder Device An Observational Study Using Data from the Pediatric Health Information Systems Database. American Heart Journal 192: 85-97, Oct 2017.

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Last updated: 02/08/2018
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