Welcome to the Andrabi Lab
Special Announcements
- New Publication: Structure-guided design of native-like HIV Env Single Chain Trimers for enhanced stability, immunogenicity, and versatile vaccine delivery. Stabilizing the HIV envelope (Env) trimer in its native prefusion conformation is key to eliciting broadly neutralizing antibodies (bnAbs). We present a generalizable single-chain trimer-(SCT) design platform that enables the production of stable, native-like Env trimers across diverse HIV strains. (Accepted Manuscript)
- Congratulations to Mr. Li and Team
- New Publication: 7 August 2026! Directed evolution of a stem-helix-targeting antibody enables MERS-CoV cross-neutralization through enhanced binding affinity. Broadly neutralizing antibodies (bnAbs) targeting conserved regions of the betacoronavirus spike are important for pan-betacoronavirus protection and pandemic preparedness. Here, we report the isolation of a human monoclonal antibody, CC65.1, from a SARS-CoV-2 convalescent donor that targets the conserved S2 stem helix region. CC65.1 neutralizes various sarbecoviruses, including SARS-CoV-2, and binds to the MERS-CoV spike but lacks MERS-CoV-neutralizing activity due to insufficient binding affinity.
- Congratulations to Dr. Zhou and Team!!
- New Publication: 23 June 2026! Heterologous betacoronavirus spike immunization in non-human primates elicits antibodies that neutralize both sarbeco- and merbecoviruses. In anticipation of future coronavirus (CoV) pandemics, developing vaccines that elicit broadly neutralizing antibodies (bnAbs) against diverse CoVs is critical. Here, we vaccinated rhesus macaques with the SARS-CoV-2 spike (S)-protein, then boosted with heterologous β-CoV S-proteins to focus responses to common conserved S2 bnAb epitopes. Initial SARS-CoV-2 priming elicited receptor-binding domain (RBD)-focused responses, while MERS-CoV boosting redirected responses toward the S2 region, including the stem-helix bnAb site.These findings provide proof-of-principle for vaccination strategies that elicit broadly protective β-coronavirus responses and highlight non-human primates as a translational model for evaluating S2-targeted immunogens.
- Congratulations to Dr. Dueker and the Team!!
- New Publication: 14 April 2026! Germline-targeting HIV immunogen induces cross-neutralizing antibodies in outbred macaques. Inducing broadly neutralizing antibodies (bnAbs) remains a challenge in HIV vaccine development. Mishra et al. show that an engineered germline-targeting HIV trimer, Q23-APEX-GT2, primes rare V2-apex bnAb precursors in humanized mice and outbred macaques, eliciting antibodies with modest neutralization breadth. Structural analyses confirm V2-apex bnAb site targeting and diverse CDRH3-mediated binding modes resembling human bnAbs, providing proof of principle for targeted vaccine strategies.
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- Congratulations to Drs. Mishra, Liang, Roark and the Team!!
- New Publication: 13 February 2026! Rapidly acquired HIV-1 neutralization breadth in a rhesus V2 apex knockin mouse model after a single bolus immunization.
- Congratulations to Drs. Ghosh, Habib, Mishra, Roark and the Team!!
- New Publication: 22 July 2025! Broadly neutralizing antibodies targeting a conserved silent face of spike RBD resist extreme SARS-CoV-2 antigenic drift.
- Congratulations to Dr. Song and Team!!
bioRxiv Releases
- Protective pan-betacoronavirus neutralizing antibodies by vaccination. Summary: Epitope-focused S2 stem-helix nanoparticle immunogens elicit protective broadly neutralizing antibodies (bnAbs) against diverse betacoronaviruses in non-human primates, establishing a framework for development of pan-betacoronavirus vaccines.
- Early clonal dominance at priming sets the trajectory for broad HIV serum neutralization. The findings presented here by Liang et al, establish priming efficiency coupled with early clonal dominance as key determinants of serum bnAb induction and provide a mechanistic framework to guide rational HIV vaccine design.
Raiees Andrabi
Raiees Andrabi is an Associate Professor of Medicine, Perelman School of Medicine, Division of Infectious Diseases, Department of Medicine, University of Pennsylvania. Raiees Andrabi earned his PhD degree from the All India Institute of Medical Sciences in Biochemistry and performed his postdoctoral work in Dennis Burton’s laboratory at The Scripps Research Institute. The overarching goal of the Andrabi laboratory is to design vaccine immunogens and strategies that elicit protective broadly neutralizing antibody (bnAb) responses against viruses with complex glycoprotein surfaces—and to translate these into effective human vaccines. The Andrabi Lab receives funding from the National Institutes of Health and The Gates Foundation.
Research Focus
The overarching goal of the Andrabi laboratory is to design vaccine immunogens and strategies that elicit protective broadly neutralizing antibody (bnAb) responses against viruses with complex glycoprotein surfaces—and to translate these into effective human vaccines. We focus on two main areas: 1) Structure-guided immunogen design—leveraging structure- and in vitro directed evolution guided strategies to develop vaccines targeting challenging viral surface antigens, including those from HIV, arenaviruses, and coronaviruses. 2) B cell immunobiology—deciphering the affinity maturation pathways required for bnAb development during infection and vaccination, with the aim of guiding next-generation vaccine design.
Our work has contributed important advances in vaccinology and antibody-mediated immunity. We developed germline-targeting trimer immunogens designed to initiate HIV V2-apex bnAb responses (Andrabi et al., Immunity, 2015) and an immunofocusing chimpanzee SIV Env trimer that showed promise in preclinical models (Andrabi et al., Cell Reports, 2019). More recently, we demonstrated that a single dose of the germline-targeting immunogen Q23-APEX-GT1 elicits cross-neutralizing antibodies in a stringent knock-in mouse model (Ghosh et al., Science Immunology, 2026). An improved immunogen, Q23-APEX-GT2, efficiently activated rare V2-apex–specific B cells in outbred rhesus macaques and elicited tier-2 cross-neutralizing mAbs, providing proof-of-principle that authentic bnAb precursors can be primed in an outbred primate model (Mishra et al., Immunity, 2026). Most recently, we showed that priming efficiency and early clonal dominance are key determinants of serum bnAb induction (Liang et al., bioRxiv, 2026). We have also defined mechanisms governing bnAb maturation and escape resistance during HIV infection (Lee & Andrabi et al., Immunity, 2017; Andrabi et al., Immunity, 2017).
Our coronavirus research has identified and advanced a conserved vulnerability with potential for pan-betacoronavirus vaccine development. We discovered the first human S2 stem-helix bnAbs against SARS-CoV-2 (Song et al., Nature Communications, 2021) and subsequently defined a conserved S2 stem-helix epitope shared across betacoronaviruses (Zhou et al., Science Translational Medicine, 2022). We demonstrated that antibodies targeting this site can protect against SARS-CoV-1, SARS-CoV-2, and MERS-CoV (Zhou et al., Immunity, 2023), and more recently established proof-of-principle that heterologous spike prime–boost vaccination can elicit S2 stem bnAbs in nonhuman primates that closely resemble human antibodies (Dueker et al., Cell Reports, 2026; Zhou et al., bioRxiv, 2026). In parallel, we have isolated potent sarbecovirus RBD bnAbs from humans and nonhuman primates (He et al., Nature Immunology, 2022; Science Translational Medicine, 2022; Song et al., Cell Reports, 2025), providing leads for antibody-based therapeutics and pan-sarbecovirus vaccine development.