Kyle Bittinger
Kyle Bittinger, Ph.D.
Assistant Professor of Pediatrics (Gastroenterology, Hepatology and Nutrition) at the Children's Hospital of Philadelphia
Analytical Core Director, Microbiome Center, Children's Hospital of Philadelphia/Perelman School of Medicine, University of Pennsylvania
Department: Pediatrics
Contact information
Children's Hospital of Philadelphia
Microbiome Center
Roberts Center for Pediatric Research
2716 South Street, 14th Floor
Philadelphia, PA 19146-2305
Microbiome Center
Roberts Center for Pediatric Research
2716 South Street, 14th Floor
Philadelphia, PA 19146-2305
Office: 267-425-1641
Email:
bittingerk@email.chop.edu
bittingerk@email.chop.edu
Graduate Group Affiliations
Education:
B.S. (Chemistry)
University of Pittsburgh, 2001.
Ph.D. (Physical Chemistry)
Massachusetts Institute of Technology, 2008.
Permanent linkB.S. (Chemistry)
University of Pittsburgh, 2001.
Ph.D. (Physical Chemistry)
Massachusetts Institute of Technology, 2008.
Selected Publications
Tu V, Ren Y, Tanes C, Mukhopadhyay S, Daniel SG, Li H, Bittinger K: A quantitative approach to measure and predict microbiome response to antibiotics. mSphere Page: e0048824, Sep 2024 Notes: Epub ahead of print.Drake MJ, Daniel SG, Baker LD, Indugu N, Bittinger K, Dickens C, Zackular JP, Pitta D, Redding LE: Effects of dietary zinc on the gut microbiome and resistome of the gestating cow and neonatal calf. Anim Microbiome 6(1): 39, Jul 2024.
Tu V, Ren Y, Tanes C, Mukhopadhyay S, Daniel SG, Li H, Bittinger K: A quantitative approach to measure and predict microbiome response to antibiotics. mSphere Jul 2024 Notes: In press.
Tanes C, Tu V, Daniel S, Bittinger K: Unassigning bacterial species for microbiome studies. mSystems 9(7): e0051524, Jul 2024.
Zong W, Friedman ES, Allu SR, Firrman J, Tu V, Daniel SG, Bittinger K, Liu L, Vinogradov SA, Wu GD: Disruption of intestinal oxygen balance in acute colitis alters the gut microbiome. Gut Microbes 16(1): 2361493, Jul 2024.
Bittinger K, Ren Y, Zhao C, Tanes C, Downes K, Mattei L, Breton J, Conrad M, Zackular J, Devas N, Li H, Bushman FD, Wu GD, Baldassano RN : Quantifying antibiotic-specific perturbations of the gut microbiome in pediatric inflammatory bowel disease. International Human Microbiome Congress Jun 2024 Notes: IHMC 2024, Rome, IT.
Benitez A, Tanes C, Friedman ES, Zackular JP, Ford E, Gerber JS, DeRusso PA, Kelly A, Li H, Elovitz MA, Wu GD, Zemel B, Bittinger K: Antibiotic exposure is associated with minimal gut microbiome differences in healthy term infants. American Society for Microbiology Jun 2024 Notes: ASM Microbe 2024, Atlanta GA.
Katona BW, Shukla A, Hu W, Nyul T, Dudzik C, Arvanitis A, Clay D, Dungan ME, Weber M, Tu V, Hao F, Chau L, Buchner AM, Falk GW, Jaffe DL, Ginsberg GG, Palmer S, Zhan X, Patterson AD, Bittinger K, Ni J: Development of a microbiome-and metabolite-based prediction tool for colonic polyposis with and without a known genetic driver. Gastroenterology 166(5): S-375, May 2024 Notes: Digestive Disease Week 2024, Washington, DC.
Swisa A, Kieckhaefer J, Daniel SG, El-Mekkoussi H, Kolev HM, Tigue M, Jin C, Assenmacher CA, Dohnalová L, Thaiss CA, Karlsson NG, Bittinger K, Kaestner KH: The evolutionarily ancient FOXA transcription factors shape the murine gut microbiome via control of epithelial glycosylation. Dev Cell May 2024 Notes: Online ahead of print.
Tanes C, Li Y, Iyer PG, Wang KK, Lightdale CJ, Wang TC, Rustgi AK, del Portillo A, Lagana SM, Falk GW, Ginsberg GG, Wu GD, Quante M, Friedman ES, Li H, Bittinger K, Abrams JA: Increased reflux secondary bile acids are associated with shifts to the microbiome and transcriptome in Barrett's esophagus. Gastroenterology 166(5): S-7, May 2024 Notes: Digestive Disease Week 2024, Washington, DC.