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- Li H, Srinivasan D, Zhuo C, Cui Z, Gur RE, Gur RC, Oathes DJ, Davatzikos C, Satterthwaite TD, Fan Y. Computing personalized brain functional networks from fMRI using self-supervised deep learning. Med Image Anal. 2023 Jan 21;85:102756. doi: 10.1016/j.media.2023.102756. Epub ahead of print. PMID: 36706636.
- Weaver JK, Martin-Olenski M, Logan J, Broms R, Antony M, Van Batavia J, Weiss DA, Long CJ, Smith AL, Zderic SA, Huang J, Fan Y, Tasian GE. Deep Learning of Videourodynamics to Classify Bladder Dysfunction Severity in Patients with Spina Bifida. J Urol. 2023 Feb 14:101097JU0000000000003267. doi: 10.1097/JU.0000000000003267. Epub ahead of print. PMID: 36787376.
- Zhou Z, Li H, Srinivasan D, Abdulkadir A, Nasrallah I, Wen J, Doshi J, Erus G, Mamourian E, Bryan NR, Wolk DA, Beason-Held L, Resnick SM, Satterthwaite TD, Davatzikos C, Shou H, Fan Y; ISTAGING Consortium. Multiscale functional connectivity patterns of the aging brain learned from harmonized rsfMRI data of the multi-cohort iSTAGING study. Neuroimage. 2023 Jan 30:119911. doi: 10.1016/j.neuroimage.2023.119911. Epub ahead of print. PMID: 36731813.
- Cynthia H. Y. Fu, Guray Erus, Yong Fan, Mathilde Antoniades, Danilo Arnone, Stephen R. Arnott, Taolin Chen, Ki Sueng Choi, Cherise Chin Fatt, Benicio N. Frey, Vibe G. Frokjaer, Melanie Ganz, Jose Garcia, Beata R. Godlewska, Stefanie Hassel, Keith Ho, Andrew M. McIntosh, Kun Qin, Susan Rotzinger, Matthew D. Sacchet, Jonathan Savitz, Haochang Shou, Ashish Singh, Aleks Stolicyn, Irina Strigo, Stephen C. Strother, Duygu Tosun, Teresa A. Victor, Dongtao Wei, Toby Wise, Rachel D. Woodham, Roland Zahn, Ian M. Anderson, J. F. William Deakin, Boadie W. Dunlop, Rebecca Elliott, Qiyong Gong, Ian H. Gotlib, Catherine J. Harmer, Sidney H. Kennedy, Gitte M. Knudsen, Helen S. Mayberg, Martin P. Paulus, Jiang Qiu, Madhukar H. Trivedi, Heather C. Whalley, Chao-Gan Yan, Allan H. Young, Christos Davatzikos, AI-based dimensional neuroimaging system for characterizing heterogeneity in brain structure and function in major depressive disorder: COORDINATE-MDD consortium design and rationale. BMC Psychiatry 23, 59 (2023). https://doi.org/10.1186/s12888-022-04509-7
- J.K. Weaver, J. Logan, R. Broms, M. Antony, M. Rickard, L. Erdman, R. Edwins, R. Pominville, J. Hannick, L. Woo, B. Viteri, N. D’Souza, S. Viswanath, C. Flask, A. Lorenzo, Y. Fan, G.E. Tasian, Deep Learning of Renal Scans in Children with Antenatal Hydronephrosis, Journal of Pediatric Urology, 2023, https://doi.org/10.1016/j.jpurol.2022.12.017
- Adam Pines, Arielle S. Keller, Bart Larsen, Maxwell Bertolero, Arian Ashourvan, Dani S. Bassett, Matthew Cieslak, Sydney Covitz, Yong Fan, Eric Feczko, Audrey Houghton, Amanda R. Rueter, Manish Saggar, Golia Shafiei, Tinashe M. Tapera, Jacob Vogel, Sarah M. Weinstein, Russell T. Shinohara, Leanne M. Williams, Damien A. Fair, Theodore D. Satterthwaite, Development of top-down cortical propagations in youth, Neuron,
2023, https://doi.org/10.1016/j.neuron.2023.01.014 - Li H, De Deng Z, Oathes D, Fan Y. Computation of transcranial magnetic stimulation electric fields using self-supervised deep learning. Neuroimage. 2022 Oct 21:119705. doi: 10.1016/j.neuroimage.2022.119705. Epub ahead of print. PMID: 36280099.
- Shanmugan S, Seidlitz J, Cui Z, Adebimpe A, Bassett DS, Bertolero MA, Davatzikos C, Fair DA, Gur RE, Gur RC, Larsen B, Li H, Pines A, Raznahan A, Roalf DR, Shinohara RT, Vogel J, Wolf DH, Fan Y, Alexander-Bloch A, Satterthwaite TD. Sex differences in the functional topography of association networks in youth. Proc Natl Acad Sci U S A. 2022 Aug 16;119(33):e2110416119. doi: 10.1073/pnas.2110416119. Epub 2022 Aug 8. PMID: 35939696.
- Romanello Joaquim, Miguel, Emma E. Furth, Yong Fan, Hee Kwon Song, Stephen Pickup, Jianbo Cao, Hoon Choi, Mamta Gupta, Quy Cao, Russell Shinohara, Deirdre McMenamin, Cynthia Clendenin, Thomas B. Karasic, Jeffrey Duda, James C. Gee, Peter J. O’Dwyer, Mark A. Rosen, and Rong Zhou. 2022. "DWI Metrics Differentiating Benign Intraductal Papillary Mucinous Neoplasms from Invasive Pancreatic Cancer: A Study in GEM Models" Cancers 14, no. 16: 4017. https://doi.org/10.3390/cancers14164017
- Babajide R, Lembrikova K, Ziemba J, Ding J, Li Y, Fermin AS, Fan Y, Tasian GE. Automated Machine Learning Segmentation and Measurement of Urinary Stones on CT Scan. Urology. 2022 Jul 28:S0090-4295(22)00626-4. Epub ahead of print. PMID: 35908740. doi: https://doi.org/10.1016/j.urology.2022.07.029
- Zaixu Cui, Hongming Li, Cedric H Xia, Bart Larsen, Azeez Adebimpe, Graham L Baum, Matt Cieslak, Raquel E Gur, Ruben C Gur, Tyler M Moore, Desmond J Oathes, Aaron F Alexander-Bloch, Armin Raznahan, David R Roalf, Russell T Shinohara, Daniel H Wolf, Christos Davatzikos, Danielle S Bassett, Damien A Fair, Yong Fan, Theodore D Satterthwaite: Individual Variation in Functional Topography of Association Networks in Youth. Neuron, 106(2):340-353.e8, April 2020
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Yong Fan, Yong Liu, Hong Wu, Yihui Hao, Haihong Liu, Zhening Liu, and Tianzi Jiang: Discriminant analysis of functional connectivity patterns on Grassmann manifold. Neuroimage 56(4): 2058-67, Jun 2011.