Publications

  • The anterior Hox gene ceh-13 and elt-1/GATA activate the posterior Hox genes nob-1 and php-3 to specify posterior lineages in the C. elegans embryo

    The anterior Hox gene ceh-13 and elt-1/GATA activate the posterior Hox genes nob-1 and php-3 to specify posterior lineages in the C. elegans embryo

    bioRxiv, March 2021
  • Lineage-specific control of convergent differentiation by a Forkhead repressor

    Lineage-specific control of convergent differentiation by a Forkhead repressor

    bioRxiv, Dec 2020
  • ngn-1/neurogenin activates transcription of multiple terminal  selector transcription factors in the Caenorhabditis elegans nervous system.

    ngn-1/neurogenin activates transcription of multiple terminal selector transcription factors in the Caenorhabditis elegans nervous system.

    G3: Genes, Genomics, Genetics. April 2020.
  • Neurogenesis: Silencing the alternative

    Neurogenesis: Silencing the alternative

    eLife. Aug 2019.
  • A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution

    A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution

    Science. Sep 2019.
  • H3K9me2 orchestrates inheritance of spatial positioning of peripheral heterochromatin through mitosis.

    H3K9me2 orchestrates inheritance of spatial positioning of peripheral heterochromatin through mitosis.

    eLife. June 2019.
  • Gene expression distribution deconvolution in single-cell RNA sequencing.

    Gene expression distribution deconvolution in single-cell RNA sequencing.

    PNAS. July 2018
  • SAVER: gene expression recovery for single-cell RNA sequencing.

    SAVER: gene expression recovery for single-cell RNA sequencing.

    Nature Methods. July 2018.
  • Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.

    Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.

    Cell Systems. Feb 2018.
  • Systems biology of embryonic development: Prospects for a complete understanding of the Caenorhabditis elegans embryo.

    Systems biology of embryonic development: Prospects for a complete understanding of the Caenorhabditis elegans embryo.

    Wiley Online Library. Jan 2018.
  • The Lipocalin LPR-1 Cooperates with LIN-3/EGF Signaling To Maintain Narrow Tube Integrity in Caenorhabditis elegans.

    The Lipocalin LPR-1 Cooperates with LIN-3/EGF Signaling To Maintain Narrow Tube Integrity in Caenorhabditis elegans.

    Genetics. March 2017.
  • Combinatorial decoding of the invariant C. elegans embryonic lineage in space and time.

    Combinatorial decoding of the invariant C. elegans embryonic lineage in space and time.

    Genesis. Apr 2016.
  • Overlapping cell population expression profiling and regulatory inference in C. elegans.

    Overlapping cell population expression profiling and regulatory inference in C. elegans.

    BMC Genomics. Feb 2016.
  • Quantitative Differences in Nuclear β-catenin and TCF Pattern Embryonic Cells in C. elegans.

    Quantitative Differences in Nuclear β-catenin and TCF Pattern Embryonic Cells in C. elegans.

    PLOS Genetics. Oct 2015.

More Publications

(Murray lab members are in bold)