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Publications Supported by PenNSAM

2024

  • Hecht AL, Harling LC, Friedman ES, Tanes C, Lee J, Firrman J, Hao F, Tu V, Liu L, Patterson AD, Bittinger K, Goulian M, Wu GD. Dietary carbohydrates regulate intestinal colonization and dissemination of Klebsiella pneumoniae. J Clin Invest. 2024 Mar 21:e174726. PMID: 3851240.
  • Rimal B, Collins SL, Tanes CE, Rocha ER, Granda MA, Solanki S, Hoque NJ, Gentry EC, Koo I, Reilly ER, Hao F, Paudel D, Singh V, Yan T, Kim MS, Bittinger K, Zackular JP, Krausz KW, Desai D, Amin S, Coleman JP, Shah YM, Bisanz JE, Gonzalez FJ, Vanden Heuvel JP, Wu GD, Zemel BS, Dorrestein PC, Weinert EE, Patterson AD. Bile salt hydrolase catalyses formation of amine-conjugated bile acids. Nature 2024 Feb;626. PMID: 38326609

  • Daniel N, Wu GD, Walters W, Compher C, Ni J, Delaroque C, Albenberg L, Ley RE, Patterson AD, Lewis JD, Gewirtz AT, Chassaing B. Human Intestinal Microbiome Determines Individualized Inflammatory Response to Dietary Emulsifier Carboxymethylcellulose Consumption. Cell Mol Gastroenterol Hepatol. 2024;17(2):315-318. PMID: 37931789.

  • Compher CW, Quinn R, Haslam R, Bader E, Weaver J, Dudek S, Ritchie MD, Lewis JD, Wu GD. Penn Healthy Diet survey: pilot validation and scoring. Br J Nutr. 2024 Jan 14;131(1):156-162. Epub 2023 Jul 31. PMID: 37519237.

2023

  • Carr RM, Li Y, Chau L, Friedman ES, Lee JJ, Adorini L, Erickson M, Zaru L, Shringarpure R, MacConell L, Bittinger K, Li H, Wu GD. An integrated analysis of fecal microbiome and metabolomic features distinguish non-cirrhotic NASH from healthy control populations. Hepatology 2023 Dec 1;78(6):1843-1857. PMID: 37222264 NIHMS1902224.

  • Wong AC, Devason AS, Umana IC, Cox TO, Dohnalová L, Litichevskiy L, Perla J, Lundgren P, Etwebi Z, Izzo LT, Kim J, Tetlak M, Descamps HC, Park SL, Wisser S, McKnight AD, Pardy RD, Kim J, Blank N, Patel S, Thum K, Mason S, Beltra JC, Michieletto MF, Ngiow SF, Miller BM, Liou MJ, Madhu B, Dmitrieva-Posocco O, Huber AS, Hewins P, Petucci C, Chu CP, Baraniecki-Zwil G, Giron LB, Baxter AE, Greenplate AR, Kearns C, Montone K, Litzky LA, Feldman M, Henao-Mejia J, Striepen B, Ramage H, Jurado KA, Wellen KE, O'Doherty U, Abdel-Mohsen M, Landay AL, Keshavarzian A, Henrich TJ, Deeks SG, Peluso MJ, Meyer NJ, Wherry EJ, Abramoff BA, Cherry S, Thaiss CA, Levy M. Serotonin reduction in post-acute sequelae of viral infection. Cell. 2023 Oct 26;186(22):4851-4867. PMID: 37848036.

  • Bass R, Tanes C, Bittinger K, Li Y, Lee H, Friedman ES, Koo I, Patterson AD, Liu Q, Wu GD, Stallings VA. Changes in fecal lipidome after treatment with ivacaftor without changes in microbiome or bile acids. J Cyst Fibros. 2023 Oct 7:S1569-1993(23)00915-3. PMID: 37813785.

  • Krasnovsky L, Crowley AP, Naeem F, Wang LS, Wu GD, Chao AM. A Scoping Review of Nutritional Biomarkers Associated with Food Security. Nutrients. 2023 Aug 14;15(16):3576. PMID: 37630766

  • Schneider KM, Blank N, Alvarez Y, Thum K, Lundgren P, Litichevskiy L, Sleeman M, Bahnsen K, Kim J, Kardo S, Patel S, Dohnalová L, Uhr GT, Descamps HC, Kircher S, McSween AM, Ardabili AR, Nemec KM, Jimenez MT, Glotfelty LG, Eisenberg JD, Furth EE, Henao-Mejia J, Bennett FC, Pierik MJ, Romberg-Camps M, Mujagic Z, Prinz M, Schneider CV, Wherry EJ, Bewtra M, Heuckeroth RO, Levy M, Thaiss CA. The enteric nervous system relays psychological stress to intestinal inflammation. Cell. 2023 Jun 22;186(13):2823-2838. PMID: 37236193

  • Perler BK, Friedman ES, Wu GD. The Role of the Gut Microbiota in the Relationship Between Diet and Human Health. Annu Rev Physiol. 2023 Feb 10;85:449-468. PMID: 36375468.

  • Palchaudhuri S, Mehta SJ, Snider CK, Hudson L, Wu GD, Pickett-Blakely O. Hospital Discharge on Enteral Nutrition is Associated with Increased Hospital Readmissions. J Am Nutr Assoc. 2023 Feb;42(2):207-210. PMID: 35512777.

 

2022

  • Delaroque C, Wu GD, Compher C, Ni J, Albenberg L, Liu Q, Tian Y, Patterson AD, Lewis JD, Gewirtz AT, Chassaing B. Diet standardization reduces intra-individual microbiome variation. Gut Microbes. 2022 Jan-Dec;14(1):2149047. PMID: 36426908

  • Compher CW, Quinn R, Burke F, Piccinin D, Sartor L, Lewis JD, Wu GD. Development of the Penn Healthy Diet screener with reference to adult dietary intake data from the National Health and Nutrition Examination Survey. Nutr J. 2022 Nov 17;21(1):70. PMID: 36384552

  • Palchaudhuri S, Mehta SJ, Snider CK, Parsikia A, Hudson L, Compher C, Lewis JD, Wu GD, Pickett-Blakely O. Causes of readmissions for patients discharged on enteral nutrition. JPEN J Parenter Enteral Nutr. 2022 Sep;46(7):1672-1676. PMID: 35040141.

  • Uhl S, Siddique SM, Bloschichak A, McKeever W, D'Anci K, Leas B, Mull NK, Compher C, Lewis JD, Wu GD, Tsou AY. Interventions for malnutrition in hospitalized adults: A systematic review and meta-analysis. J Hosp Med. 2022 Jul;17(7):556-564. doi: 10.1002/jhm.12891. Epub 2022 Jun 21. PMID: 35729866.

  • Kastl A, Zong W, Gershuni VM, Friedman ES, Tanes C, Boateng A, Mitchell WJ, O'Connor K, Bittinger K, Terry NA, Bales C, Albenberg L, Wu GD. Dietary fiber-based regulation of bile salt hydrolase activity in the gut microbiota and its relevance to human disease. Gut Microbes. 2022 Jan-Dec;14(1):2083417. PMID: 35658830.

  • Mennella JA, Li Y, Bittinger K, Friedman ES, Zhao C, Li H, Wu GD, Trabulsi JC. The Macronutrient Composition of Infant Formula Produces Differences in Gut Microbiota Maturation That Associate with Weight Gain Velocity and Weight Status. Nutrients. 2022 Mar 15;14(6):1241. PMID: 35334900.

  • Chassaing B, Compher C, Bonhomme B, Liu Q, Tian Y, Walters W, Nessel L, Delaroque C, Hao F, Gershuni V, Chau L, Ni J, Bewtra M, Albenberg L, Bretin A, McKeever L, Ley RE, Patterson AD, Wu GD, Gewirtz AT, Lewis JD. Randomized Controlled-Feeding Study of Dietary Emulsifier Carboxymethylcellulose Reveals Detrimental Impacts on the Gut Microbiota and Metabolome. Gastroenterology. 2022 Mar;162(3):743-756. PMID: 34774538.

2021

  • Tanes C, Bittinger K, Gao Y, Friedman ES, Nessel L, Paladhi UR, Chau L, Panfen E, Fischbach MA, Braun J, Xavier RJ, Clish CB, Li H, Bushman FD, Lewis JD*, Wu GD*. Role of dietary fiber in the recovery of the human gut microbiome and its metabolome. Cell Host & Microbe. 2021 Mar 10;29(3):394-407. PMID: 33440171. PMCID: PMC8022197  *Co-Communicating Authors.

  • Gershuni V, Li Y, Elovitz M, Li H, Wu GD, Compher CW. Maternal gut microbiota reflecting poor diet quality is associated with spontaneous preterm birth in a prospective cohort study. Am J Clin Nutr. 2021 Mar 11;113(3):602-611. PMID: 33515003