Cell and Developmental Biology Microscopy Core

Offline Computer Workstations

Workstations for post-processing and analysis of images open to all CDB Microscopy Core customers.

BRB ZEN/Volocity Workstation

Room 1118 BRB II/III

Windows 7 OS

Volocity 6.3: Visualization, restoration, and quantitation for 3D rendering, measurements (volumes, distances, colocalization), and deconvolution.

MetaMorph Premier

ZEN 2011 Offline, full version

Fiji/ImageJ

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BRB Imaris Workstation

Room 1118 BRB II/III

Windows 10 OS, AMD Radeon R9 390 Series GPU

Imaris 9.2: Full license includes spot detection, filament tracer for neuron and spine detection, surface detection and analysis, Imaris Cell for analyzing intracellular components, particle tracking, and statistical analysis.

Fiji/ImageJ

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BRB Huygens Workstation

Room 1118 BRB II/III

Windows 10 OS, NVIDIA GeForce GTX 1080 GPU

SVI Huygens Professional with GPU acceleration: Deconvolution wizard for widefield, confocal, spinning disk confocal, and SPIM/lightsheet images in a variety of file formats including Zeiss, Leica, Nikon, Olympus, and MetaMorph. PSF distiller to compute point-spread functions from user-acquired data. Stitcher for automatic alignment and stitching of 2D or 3D tile scans. SPIM/lightsheet fusion wizard for registration and fusion of multi-view data sets.

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