ZOOM links:
PMI Muscle Club (CRB 702, TUE at 12 pm)
Cell Motility Journal Club zoom (CRB 702, WED at 12 pm)
Lab Meeting zoom (CRB 702, Mon at 4 pm)
UPENN zoom 

Upenn Mail:
Webmail

Databases and general protein resources

• ExPASy General Protein Resources
• NCBI Protein Databases and Resources
• EMBL-EBI Eu. Bioinfo. Inst.,Protein ResourceResources
• UniProt Universal Protein Resource
• PDB Protein Data Bank
• PDBe Protein Data Bank Europe
• EMDB The Electron Microscopy Data Bank
• The Human Protein Atlas
• BioGPS Gene expression level databases for various tissue 
• A Protein Modification Resource

Gene repositories

• ATCC Biological material resource
• Addgene Plasmid repository
• Dharmacon Collection of cDNAs and ORFs
• DNAsu Plasmid repository

Lab tools

• Benchling oligo design
• Centrifuge Rotor Speed Calculator
• Molarity Calculator
• Concentration Calc
• Biorender Create science figures
• Science gateway Tools & lab resources
• IDT gBlocks gene synthesis ordering
• ProtΠ isoelectric point and net charge of proteins calc.
• PeptideCutter Protease cleavage sites prediction
• ProtParam calc. of physical and chemical param. of proteins
• Translate DNA/RNA to protein
• Reverse Translate amino acids seq to DNA/RNA
• Tenua Kinetics Simulation Program
• Sequence Manipulation Suite
• FASTA converter
• Jalview Multiple Sequence Alignment Editor
• 3DView pdb viewer
• iCn3D pdb viewer
• FirstGlance in Jmol pdb structure analysis
• PyMOL Molecular Visualization
• Chimera Molecular Visualization
• WebLogo Sequence Aligment representation
• MyCurveFit

Crystallography tools

• MATTPROB Matthews Coefficient (Vm) Probability Calculation
• HKL Research X-ray Data Processing
• XDS/XSCALE X-ray Data Processing
• SnB Direct-Methods Software Determination of Crystal Structures
• SHELX Suite of Programs for Crystal Structure Determination
• PHENIX Automated determination of macromolecular structures using X-ray crystallography
• CCP4 Crystallography Software Suite
• Coot Model Building, Validation and Refinement
• SHARP/BUSTER Structure Phasing Software
• Crystallographic Software list
  

Crystallographic databases

• Anomalous Scattering X-ray Anomalous Scattering Resources
• Heavy-Atom Databank Heavy Atom Derivatives Resources forthe Solution of Protein Structures
• Heavy Atom Reactivity Table Heavy Atom Reactivities with amino acids

Synchrotrons and beamlines

• APS Argonne National Laboratory(Chicago, IL)
  
• BioCARS Bio-Consortium for the Advanced Radiation Source
  
• IMCA-CAT Ind. Macromol. Crystallography Associacion Collaborative Access Team
  
• BioCAT Biophysics Collaborative Access Team
  
• Berkley Lab Advanced Light Source (Berkeley,CA)
• CHESS Cornell High Energy Synchrotron Source (Ithaca, NY)
• NSLS II National Synchrotron Light Source (Brookhaven, NY)

Protein sequence and structure analysis

Cryo-EM facilities

• UPENN Institute of Structural Biology
• Globus data management
• NCCAT New York Structural Biology Center Cryo-EM
  
• NCEF National Cryo-EM Facility (NCI)
• PNCC Pacific Northwest CryoEM Center
• SLAC Stanford SLAC CryoEM Center
• CryoEM Service Centers
• EMRL - UPENN
• Beckman Center - UPENN
• Beckman Center - UPENN iLab
• EMRL Vitrobot schedule
  
  

Crystallography hardware

• Hudson Art Robbins Instruments crystallisation robotics
• Bruker X-ray Detectors and X-ray Sources
• Douglas Instruments Oryx crystallisation robotics
• Hampton Research Protein Crystallization Products
• Jena Bioscience Protein Crystallization Products
• MiTeGen Crystallization, CryoEM Products
• P212121Protein Crystallization Products
• Rigaku Resources
• HW crystallization center

UPenn links

• PSOM events calendar
• PSOM service phone list
• Physiology Department
• BlueSkyPhysiology departmental events
• Pennsylvania Muscle Institute
• Cell Motility Journal Club
• iLab/CrossLab request services at a Penn core facility
• Cell Center
• BEN Business Enterprise Network
• PMACS Academic Computing Services
• Campus Map@Upenn
• Workday@Penn
• AirPennNet access
• VoiceMail
• DART Penn cloud-based telephony service
• CAMS central account management system
• EHRS Office of Environmental Health and Radiation Safety
• Penn’s Electronic Research Notebook
• PennTEM Travel & expense management (Concur)
• Penn Mail regular Penn mail
• Penn BioRaft Research management Platform
• Penn Software licencing
• Penn Secure Share
• SPO Space Planning & Operations PSOM
• Penn Core Facilities Finder
• My.Med.
• Employee Resources
• U@Penn
• Penn Box Penn dropbox
• 25Live PSOM Scheduling & Event Services
• Office365 Upenn

Other resources

• WeTransfer big files transfer
• SlideMakers poster printing
• Penn Libraries poster printing

Scientific societies

• ASCB America Society for Cell Biology
• Biophysical Society
• ACA American Crystallographic Association

Granting agencies

• NIH National Institute of Health
• NSF National Science Fundation
• AHA American Heart Assiciation
• ACS American Cancer Society

AI tools

AI Search Engine for Research
OpenAI chatbot
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literature and guidelines
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Research-backed reports, for researchers
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AI-powered search engine
GROK AI chatbot created by xAI
Personalized AI Research Assistant
AI-powered search engine that uses a multi-agent framework
Recraft AI image generation and editing
Sora, a text-to-video model by OpenAI
The best AI, all in one place