Digital Pathology Resources

The Penn Digital Pathology Lab believes in open source tools and the sharing of digital pathology resources to increase the rigor and reproducibility of our methods. We include links below to open-source software we utilize in our lab:

Including software tools developed by our friends and colleagues at PICSL


Downloadable custom scripts for human brain histology sampling and analysis in QuPath along with video tutorials (please check back with us soon).


Published Methods Papers