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Alison Pouch, PhD
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Assistant Professor of Radiology and Bioengineering
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Core Faculty Member, Penn Center for Biomedical Image Computing and Analysis (CBICA)
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Faculty Member, Penn Cardiovascular Institute
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Core Faculty Member, Penn Institute for Computational Sciences (PICS)
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Department: Radiology
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Graduate Group Affiliations
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- Bioengineering e
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Contact information
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Perelman School of Medicine
2a Department of Radiology, Research
25 Richards Building - 6th Floor
35 3700 Hamilton Walk
Philadelphia, PA 19104
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2a Department of Radiology, Research
25 Richards Building - 6th Floor
35 3700 Hamilton Walk
Philadelphia, PA 19104
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Office: 215-898-1050
3e Lab: 215-743-7073
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3e Lab: 215-743-7073
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Education:
21 7 BS 37 (Physics - Honors Distinction, Anthropology) c
38 The College of William and Mary, 2007.
21 8 PhD 4b (Bioengineering - Biomedical Imaging and Informational Sciences) c
33 University of Pennsylvania, 2013.
21 9 Cert 23 (Biomedical Informatics) c
33 University of Pennsylvania, 2018.
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Permanent link21 7 BS 37 (Physics - Honors Distinction, Anthropology) c
38 The College of William and Mary, 2007.
21 8 PhD 4b (Bioengineering - Biomedical Imaging and Informational Sciences) c
33 University of Pennsylvania, 2013.
21 9 Cert 23 (Biomedical Informatics) c
33 University of Pennsylvania, 2018.
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12d Lobo, T., Wu, W., Litt, H., Freas, M., Goldfinger, S., Ferrari, V., Bavaria, J., Desai, N., Pouch, A.: Patient-Specific Ascending Aortic Wall Shear Stress and Strain Analysis from 4D CT. Circulation 152(Suppl_3): A4369577, 2025.
222 Yao, X., Yu, R., Hu, D., Yang, H., Lou, A., Wang, J., Lu, D., Arenas, G., Oguz, B., Pouch, A.M., Schwartz, N., Byram, B.C., Oguz, I.: SynStitch: A Self-Supervised Learning Network For Ultrasound Image Stitching Using Synthetic Training Pairs And Indirect Supervision. Proceedings of the IEEE International Symposium on Biomedical Imaging Page: 1-5, 2025 Notes: DOI: 10.1109/ISBI60581.2025.10981027. This is a peer-reviewed conference proceedings article for IEEE ISBI 2025.
163 Wu, W., Daneker, M., Herz, C., Dewey, H., Weiss, J.A., Pouch, A.M., Lu, L., Jolley, M.A.: A Non-Invasive Method For Determining Elastic Parameters Of Valve Tissue Using Physics-Informed Neural Networks. Acta Biomaterialia 200: 283-298, 2025 Notes: DOI: 10.1016/j.actbio.2025.05.021.
1b8 Li, H., Oguz, B., Arenas, G., Yao, X., Wang, J., Lu, D., Pouch, A.M., Byram, B., Schwartz, N., Oguz, I.: PRISM Lite: A Lightweight Model For Interactive 3D Placenta Segmentation In Ultrasound. Proceedings of SPIE Medical Imaging 13406: 134060B, 2025 Notes: DOI: 10.1117/12.3047410. This is a peer-reviewed conference proceedings article for SPIE Medical Imaging 2025.
202 Yao, X., Yu, R., DiSanto, N., Aghdam, E.K., Oguine, K.J., Lu, D., Lou, A., Wang, J., Hu, D., Arenas, G.A., Oguz, B., Pouch, A.M., Schwartz, N., Byram, B., Oguz, I.: LOTUS: Latent Outpainting Diffusion Model for Three-Dimensional Ultrasound Stitching. Proceedings of Machine Learning Research 2025 Notes: This is a peer-reviewed full conference proceedings article from Medical Imaging with Deep Learning (MIDL) 2025. The article is in press.
211 Guo Z, Dong NJ, Litt H, Yushkevich N, Freas M, Nunez J, Ferrari V, Hao J, Goldfinger S, Jolley MA, Bavaria J, Desai ND, Pouch AM: Towards Patient-Specific Surgical Planning for Bicuspid Aortic Valve Repair: Fully Automated Segmentation of the Aortic Valve in 4D CT. Proceedings of IEEE International Symposium on Biomedical Imaging 2025 Notes: DOI: 10.1109/ISBI60581.2025.10981269. This is a peer-reviewed conference proceedings article for IEEE ISBI 2025.
16f Haese, C.E., Dubey, V., Mathur, M., Pouch, A.M., Timek, T.A., Rausch, M.K.: Tricuspid Valve Edge-To-Edge Repair Simulations Are Highly Sensitive To Annular Boundary Conditions. Journal of the Mechanical Behavior of Biomedical Materials 163: 106879, 2025 Notes: DOI: 10.1016/j.jmbbm.2024.106879.
1a5 Chan, T.J., Sahni, A., Fang, Y., Li, J., Luthra, A., Pouch, A.M., Rajapakse, C.S.: SAM3D: Zero-Shot Semi-Automatic Segmentation in 3D Medical Images with the Segment Anything Model. Proceedings of SPIE Medical Imaging 13406, 2025 Notes: DOI: 10.1117/12.3047242. This is a peer-reviewed conference proceedings article from SPIE Medical Imaging 2025.
17d MacKay, E.M.*, Goldfinger, S.*, Chan, T.J., Grasfield, R.H., Eswar, V.J., Li, K., Cao, Q., Pouch, A.M.: Automated Structured Data Extraction From Intraoperative Echocardiography Reports Using Large Language Models. British Journal of Anaesthesia 134(5): 1308-1317, 2025 Notes: DOI: 10.1016/j.bja.2025.01.028.
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Selected Publications
206 Li, H., Oguz, B., Arenas, G., Yao, X., Wang, J., Pouch, A.M., Byram, B., Schwartz, N., Oguz, I.: Interactive Segmentation Model for Placenta Segmentation from 3D Ultrasound Images. Lecture Notes in Computer Science. Springer Nature Switzerland, Page: 132-142, 2025 Notes: DOI: 10.1007/978-3-031-73647-6_13. This is a peer-reviewed conference proceedings paper for the International Workshop on Advances in Simplifying Medical Ultrasound (ASMUS).12d Lobo, T., Wu, W., Litt, H., Freas, M., Goldfinger, S., Ferrari, V., Bavaria, J., Desai, N., Pouch, A.: Patient-Specific Ascending Aortic Wall Shear Stress and Strain Analysis from 4D CT. Circulation 152(Suppl_3): A4369577, 2025.
222 Yao, X., Yu, R., Hu, D., Yang, H., Lou, A., Wang, J., Lu, D., Arenas, G., Oguz, B., Pouch, A.M., Schwartz, N., Byram, B.C., Oguz, I.: SynStitch: A Self-Supervised Learning Network For Ultrasound Image Stitching Using Synthetic Training Pairs And Indirect Supervision. Proceedings of the IEEE International Symposium on Biomedical Imaging Page: 1-5, 2025 Notes: DOI: 10.1109/ISBI60581.2025.10981027. This is a peer-reviewed conference proceedings article for IEEE ISBI 2025.
163 Wu, W., Daneker, M., Herz, C., Dewey, H., Weiss, J.A., Pouch, A.M., Lu, L., Jolley, M.A.: A Non-Invasive Method For Determining Elastic Parameters Of Valve Tissue Using Physics-Informed Neural Networks. Acta Biomaterialia 200: 283-298, 2025 Notes: DOI: 10.1016/j.actbio.2025.05.021.
1b8 Li, H., Oguz, B., Arenas, G., Yao, X., Wang, J., Lu, D., Pouch, A.M., Byram, B., Schwartz, N., Oguz, I.: PRISM Lite: A Lightweight Model For Interactive 3D Placenta Segmentation In Ultrasound. Proceedings of SPIE Medical Imaging 13406: 134060B, 2025 Notes: DOI: 10.1117/12.3047410. This is a peer-reviewed conference proceedings article for SPIE Medical Imaging 2025.
202 Yao, X., Yu, R., DiSanto, N., Aghdam, E.K., Oguine, K.J., Lu, D., Lou, A., Wang, J., Hu, D., Arenas, G.A., Oguz, B., Pouch, A.M., Schwartz, N., Byram, B., Oguz, I.: LOTUS: Latent Outpainting Diffusion Model for Three-Dimensional Ultrasound Stitching. Proceedings of Machine Learning Research 2025 Notes: This is a peer-reviewed full conference proceedings article from Medical Imaging with Deep Learning (MIDL) 2025. The article is in press.
211 Guo Z, Dong NJ, Litt H, Yushkevich N, Freas M, Nunez J, Ferrari V, Hao J, Goldfinger S, Jolley MA, Bavaria J, Desai ND, Pouch AM: Towards Patient-Specific Surgical Planning for Bicuspid Aortic Valve Repair: Fully Automated Segmentation of the Aortic Valve in 4D CT. Proceedings of IEEE International Symposium on Biomedical Imaging 2025 Notes: DOI: 10.1109/ISBI60581.2025.10981269. This is a peer-reviewed conference proceedings article for IEEE ISBI 2025.
16f Haese, C.E., Dubey, V., Mathur, M., Pouch, A.M., Timek, T.A., Rausch, M.K.: Tricuspid Valve Edge-To-Edge Repair Simulations Are Highly Sensitive To Annular Boundary Conditions. Journal of the Mechanical Behavior of Biomedical Materials 163: 106879, 2025 Notes: DOI: 10.1016/j.jmbbm.2024.106879.
1a5 Chan, T.J., Sahni, A., Fang, Y., Li, J., Luthra, A., Pouch, A.M., Rajapakse, C.S.: SAM3D: Zero-Shot Semi-Automatic Segmentation in 3D Medical Images with the Segment Anything Model. Proceedings of SPIE Medical Imaging 13406, 2025 Notes: DOI: 10.1117/12.3047242. This is a peer-reviewed conference proceedings article from SPIE Medical Imaging 2025.
17d MacKay, E.M.*, Goldfinger, S.*, Chan, T.J., Grasfield, R.H., Eswar, V.J., Li, K., Cao, Q., Pouch, A.M.: Automated Structured Data Extraction From Intraoperative Echocardiography Reports Using Large Language Models. British Journal of Anaesthesia 134(5): 1308-1317, 2025 Notes: DOI: 10.1016/j.bja.2025.01.028.
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