Selected Publications

MacKay EM*, Goldfinger S*, Chan TJ, Grasfield RH, Eswar VJ, Li K, Cao Q, Pouch AM: Automated structured data extraction from intraoperative echocardiography reports using large language models. British Journal of Anaesthesia in press, 2025.

Guo Z, Dong NJ, Litt H, Yushkevich N, Freas M, Nunez J, Ferrari V, Hao J, Goldfinger S, Jolley MA, Bavaria J, Desai ND, Pouch AM: Towards Patient-Specific Surgical Planning for Bicuspid Aortic Valve Repair: Fully Automated Segmentation of the Aortic Valve in 4D CT. IEEE International Symposium on Biomedical Imaging in press, 2025.

Haese CE, Dubey V, Mathur M, Pouch AM, Timek TA, Rausch MK: Tricuspid valve edge-to-edge repair simulations are highly sensitive to annular boundary conditions. Journal of the Mechanical Behavior of Biomedical Materials 163: 106879, 2025.

Chan TJ, Sahni A, Fang Y, Li J, Luthra A, Pouch AM, Rajapakse CS: SAM3D: Zero-Shot Semi-Automatic Segmentation in 3D Medical Images with the Segment Anything Model. SPIE Medical Imaging 2025.

Li H, Oguz B, Arenas G, Yao X, Wang J, Pouch AM, Byram B, Schwartz N, Oguz I: Interactive Segmentation Model for Placenta Segmentation from 3D Ultrasound Images. International Workshop on Advances in Simplifying Medical Ultrasound. Springer Nature Switzerland, Page: 132-142, 2024.

W. Wu, Y. Wu, A.M. Sulentic, J. Gee, A.M. Pouch, M.A. Jolley: Physics in the Loop: Integrating Biomechanics-Derived Training Data into a Neural Ordinary Differential Equation-Based Deformable Registration Framework. Medical Imaging with Deep Learning 2024 Notes: This is a peer-reviewed conference proceedings paper for MIDL 2024.

C. Herz, N. Vergnet, S. Tian, A.H. Aly, M.A. Jolley, N. Tran, G. Arenas, A. Lasso, N. Schwartz, K.E. O'Neill, P.A. Yushkevich, A.M. Pouch: Open-Source Graphical User Interface for the Creation of Synthetic Skeletons for Medical Image Analysis. Journal of Medical Imaging 11(3), 2024 Notes: DOI: 10.1117/1.JMI.11.3.036001.

M.C.P. Nunes, H. Hatoum, A.M. Pouch, M. Padala: Mitral Valve Disease: Mechanisms to Therapies. Frontiers in Cardiovascular Medicine 11, 2024 Notes: DOI: 10.3389/fcvm.2024.1441511.

Amin S, Chan T, Tran N, Al Ghofaily L, Cheung A, Yushkevich N, Hao J, Jolley MA, Woo YJ, Bavaria J, Desai ND, Pouch AM: Fully Automatic Quantification of the Aortic Root in 4D Transesophageal Echocardiography. Circulation 150(Suppl_1): A4141884-A4141884, 2024.

Goldfinger S, Mackay E, Chan T, Eswar V, Grasfield R, Yan V, Barreto D, Pouch AM: A Systematic Approach to Prompting Large Language Models for Automated Feature Extraction from Cardiovascular Imaging Reports. Circulation 150(Suppl_1): A4139198-A4139198, 2024.