Selected Publications

Kazerooni AF, Kraya A, Rathi KS, Kim MC, Kesherwani V, Corbett R, Vossough A, Khalili N, Gandhi D, Familiar NKAM, Jin R, Huang X, Zhu Y, Sickler A, Lueder MR, Phul S, Storm PB, Ware JB, Foster JB, Mueller S, Rokita JL, Fisher MJ, Resnick AC, Nabavizadeh A.: Imaging Clusters of Pediatric Low-Grade Glioma are Associated with Distinct Molecular Characteristics. AJNR Am J Neuroradiol Feb 2025.

Fischer D, Edlow BL, Freeman HJ, Alaiev D, Wu Q, Ware JB, Detre JA, Aguirre GK.: Reconstructing Covert Consciousness: Neural Decoding as a Novel Consciousness Assessment. Neurology 104: e210208, Feb 2025.

Sokratis Charisis, Tanweer Rashid, Christina S. Dintica, Mitzi M. Gonzales, Hangfan Liu, Jeffrey B. Ware, Thomas R. Austin, Paul N. Jensen, Alison E Fohner, Jordan E. Tanley, Jingzhong Ding, José A. Luchsinger, Bonnie C. Sachs, Ilya M. Nasrallah, R Nick Bryan, Kathleen M. Hayden, David A Wolk, Katya Rascovsky, Christos Davatzikos, W.T. Longstreth Jr., Kristine Yaffe, Sudha Seshadri, Susan R. Heckbert, Timothy M. Hughes, Mohamad Habes: Modelling Small Vessel Disease Using Regional MRI Markers, and Mediating Effects on Cognitive Decline. Alzheimer's & Dementia 20(S2): e086725, January 2025 Notes: 10.1002/alz.086725.

Fathi Kazerooni A, Kraya A, Rathi KS, Kim MC, Vossough A, Khalili N, Familiar AM, Gandhi D, Khalili N, Kesherwani V, Haldar D, Anderson H, Jin R, Mahtabfar A, Bagheri S, Guo Y, Li Q, Huang X, Zhu Y, Sickler A, Lueder MR, Phul S, Koptyra M, Storm PB, Ware JB, Song Y, Davatzikos C, Foster JB, Mueller S, Fisher MJ, Resnick AC, Nabavizadeh A.: Multiparametric MRI along with machine learning predicts prognosis and treatment response in pediatric low-grade glioma. Nat Commun 16: 340, Jan 2025.

Azfar Basunia, David Fischer, Jeffrey Ware: Functional MRI techniques to detect, understand, and prognosticate disorders of consciousness. RSNA Annual Meeting - Chicago Ill. December 2024.

Gandhi DB, Khalili N, Familiar AM, Gottipati A, Khalili N, Tu W, Haldar S, Anderson H, Viswanathan K, Storm PB, Ware JB, Resnick A, Vossough A, Nabavizadeh A, Fathi Kazerooni A.: Automated pediatric brain tumor imaging assessment tool from CBTN: Enhancing suprasellar region inclusion and managing limited data with deep learning. Neurooncol Adv 6: vdae190, Dec 2024.

Fischer, David, Abella, Benjamin S., Bass, Geoffrey D., Charles, Jeremy, Hampton, Stephen, Kulick-Soper, Catherine V., Mendlik, Matthew T., Mitchell, Oscar J., Narva, Aliza M., Pino, William, Sikandar, Morgan L., Sinha, Saurabh R., Waldman, Genna J., Ware, Jeffrey B., Levine, Joshua M.: The Recovery of Consciousness via Evidence-Based Medicine and Research (RECOVER) Program: A Paradigm for Advancing Neuroprognostication. Neurology Clinical Practice 14(6): e200351, August 2024.

Mr. Ori Zaff, Dr. Alexa Walter, Mr. Drew Parker, Ms. Stefanie Darnley, Ms. Priyanka Kalyani, Mr. Griffin Anderson, Ms. Abbie Chan, Dr. Jeffrey Ware, Dr. Ragini Verma, Dr. Ramon Diaz-Arrastia: Trajectories of Traumatic Axonal Injury As Measured by Diffusion Tensor Imaging. National Neurotrauma Annual Meeting 2024 June 2024.

Familiar AM, Fathi Kazerooni A, Vossough A, Ware JB, Bagheri S, Khalili N, Anderson H, Haldar D, Storm PB, Resnick AC, Kann BH, Aboian M, Kline C, Weller M, Huang RY, Chang SM, Fangusaro JR, Hoffman LM, Mueller S, Prados M, Nabavizadeh A.: Towards Consistency in Pediatric Brain Tumor Measurements: Challenges, Solutions, and the Role of AI-Based Segmentation. Neuro Oncol 26(9): 1557-1571, May 2024 Notes: doi: 10.1093/neuonc/noae093.

Vossough A, Khalili N, Familiar AM, Gandhi D, Viswanathan K, Tu W, Haldar D, Bagheri S, Anderson H, Haldar S, Storm PB, Resnick A, Ware JB, Nabavizadeh A, Fathi Kazerooni A.: Training and Comparison of nnU-Net and DeepMedic Methods for Autosegmentation of Pediatric Brain Tumors. AJNR Am J Neuroradiol 45: 1081-1089, May 2024.