Selected Publications

Cassie Kline, Fumin Lin, Angela Liou, Adam Kraya, Kristina Cole, Michael Fisher, Marilyn Li.: Genomic and molecular profiling of pediatric central nervous system tumors: a single institution analysis. SNO Annual Meeting. Washington DC. June 2023. June 2023.

Chen, Jiani; Wu, Jinhua; Schubert, Jeffrey; Lin Fumin; Denenberg, Elizabeth; Muir, Alison; Romasko, Ed; Fanning, Elizabeth; Tricia Bhatti; Luo, Minjie; Zhong, Yiming; Surrey, Lea; Li, Marilyn.: The spectrum of RAF1 fusion positive solid tumors in children and young adults. ASCO Annual Meeting. Chicago IL. June, 2023. June 2023.

Feng Xu, Ariel Long, Matthew Lueder, Kajia Cao, Weixuan Fu, Zhiqian E. Fan, Mateusz Koptyra, Jessica B. Foster, Thomas De Raedt, Chelsea Kotch, Michael J. Fisher, Marilyn M. Li.: Identification of NF1-associated Tumor Mutations in Plasma cfDNA and its Clinical Application. ACMG Annual Meeting. Salt Lake City. March 17, 2023. March 2023.

Nya D. Nelson, Feng Xu, William H. Peranteau, Marilyn Li, Jennifer Pogoriler.: Morphologic Features in Congenital Pulmonary Airway Malformations and Pulmonary Sequestrations Correlate with Mutation Status: A Mechanistic Approach to Classification. Am J Surg Pathol. Feb 2023 Notes: doi: 10.1097/PAS.0000000000002025.

. Marilyn M Li, Catherine E Cottrel, Mrudula Pullambhatla, Somak Roy, Robyn L Temple-Smolkin, Scott A Turner, Kai Wang, Yunyun Zhou, Cindy L Vnencak-Jones.: Assessments of Somatic Variant Classification Using the Association for Molecular Pathology/American Society of Clinical Oncology/College of American Pathologists Guidelines: A Report from the Association for Molecular Pathology. J Mol Diagn. 25(2): 69-86, Feb 2023 Notes: https://doi.org/10.1016/j.jmoldx.2022.11.002.

Zhiwei Ang, Katharina Hayer, Manuel Torres Diz, Carolin Schmidt, Sisi Zheng, Feng Xu, Joseph Loftus, Catherine Falkenstein, Vinodh Pillai, Emeline Chong, Marilyn M. Li, Sarah K. Tasian, Yoseph Barash, Stephen J. Schuster, and Andrei Thomas-Tikhonenko.: Alternative splicing of its 5’ untranslated region controls CD20 mRNA translation and enables resistance to CD20-directed immunotherapies. BioRxiv. 2023 Notes: doi: https://doi.org/10.1101/2023.02.19.529123.

Jeffrey Schubert*, Jinhua Wu1*, Feng Xu, Maha Patel, Netta Golenberg, Jiani Chen, Elizabeth Denenberg, Elizabeth Fanning, Weixuan Fu, Kajia Cao, Rochelle Bagatell, Theodore W. Laetsch, Adam Resnick, Mariarita Santi, Phillip Storm, Minjie Luo, Gerald Wertheim, Lea F. Surrey, Yiming Zhong, Marilyn M. Li.: The landscape of BRAF alteration in pediatric and young adult solid tumors. AMP Annual Meeting. Phoenix AZ. November 3, 2022. November 2022.

Luca Pagliaroli, Feng Xu, Weixuan Fu, Kajia Cao, Ariel Long, Angela Viaene, Adam C. Resnick, Phillip B. Storm, Mariarita Santi1,2, Marilyn M. Li.: The Clinical Utility of DNA Methylation Profiling in Pediatric CNS Tumors: Comparison of Methylation Classification and Integrated Diagnosis in a Cohort of 184 Pediatric CNS Tumors. Platform Presentation at AMP Annual Meeting. Phoenix AZ. November 5, 2022. November 2022.

Feng Xu, Chelsea Kotch, Jessica Foster, Kajia Cao, Weixuan Fu, Matt Lueder, Ariel Long, Zhiqian E. Fan, Symone Brown, Thomas De Raedt, Mateusz Koptyra, Michael Fisher, Marilyn M. Li: Development and Clinical Validation of a Liquid Biopsy Assay for Neurofibromatosis 1. ASHG Annual Meeting. Los Angeles, LA. Oct 2022.

Karleena Rybacki, Li Fang, Feng Xu, Yu Hu, Mian Umair Ahsan, Marilyn-Li, Kai Wang.: Diagnostic Gene Fusion Detection in Cancer by Adaptation of short-read CHOP Fusion Panel to Oxford Nanopore Long-read Sequencing. ASHG Annual Meeting. Los Angeles, LA. Oct 2022.