Danielle L. Mowery, Ph.D.

faculty photo
Assistant Professor of Informatics in Biostatistics and Epidemiology at the Hospital of the University of Pennsylvania
Department: Biostatistics and Epidemiology

Contact information
Department of Biomedical Informatics, University of Pennsylvania, School of Medicine
Philadelphia, PA 19104
Education:
BS (Minor in Chemistry)
Biological Sciences, University of Pittsburgh , 2006.
MS (Concentration in Health Information Systems)
Health & Rehabilitation Science, University of Pittsburgh, 2008.
MS (Concentration in Natural Language Processing)
Biomedical Informatics, University of Pittsburgh, 2010.
PhD (Concentration in Natural Language Processing)
Biomedical Informatics, University of Pittsburgh, 2014.
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Selected Publications

Mowery DL, Park A, Conway M.: Applying the Transtheoretical Model of Behavioral Change to Reddit Data: A Pilot Study of Cessation Strategies and Outcomes among Tobacco Users. HealTAC 2018. Manchester, United Kingdom. APRIL 18-19 2018.

Patel J, Krishnan A, Mowery DL, Thyvalikakath T.: Accessing Information Congruency of Documented Cardiovascular Disease between Electronic Dental and Medical Records. AMIA Annual Symposium 2018 Notes: Conference proceedings represent peer reviewed research.

Anderson T, Madden E, Zhang S, Mowery D, Chapman WW, Keyhani S. : Trends in Carotid Imaging in the VA Health System Following Choosing Wisely Recommendations: An Interrupted Time Series Analysis. Circulation: Cardiovascular Quality and Outcomes. Society for General Internal Medicine. 2018. Denver, CO. 11: 192, 2018.

Majersik J, Mowery DL, Hill B, Cannon-Albright L, Zhang M, Chapman WW.: Towards High-Precision Stroke Classification using Natural Language Processing. International Stroke Conference 2018. Los Angeles, CA 2018.

Rhoads J, Chao-Chin L, Mowery DL, Stevens V, Sauer B, Samore M.: Towards Discerning Purulent from Non-Purulent Skin and Soft Tissue Infections from Veteran Health Administration Clinical Texts. Informatics Summits. San Francisco, CA. 2018.

Chapman A, Mowery DL, Swords DS, Chapman WW, Bucher B.: Detecting Evidence of Intraabdominal Surgical Site Infections from Radiology Reports using Natural Language Processing. AMIA Annu Symposium 2017. Washington, DC. Page: 515-524, November 2017 Notes: Conference proceedings represent peer reviewed research.

Shi J, Mowery DL, Castine M, Sanders J, Zhang M, Chapman WW, Gawron L. : Extracting Intrauterine Device Usage from Clinical Texts using Natural Language Processing. Fifth IEEE International Conference on Healthcare Informatics . Park City, UT. Sep 8 2017 Notes: Conference proceedings represent peer reviewed research.

Shi J, Mowery DL.: EasyCIE: A Development Platform to Support Quick and Easy, Rule-based Clinical Information Extraction. Fifth IEEE International Conference on Healthcare Informatics Park City, UT. September 8 2017 Notes: Conference proceedings represent peer reviewed research.

Mowery DL, South BR, Patterson O, Zhu S-H, Conway M.: Investigating the Documentation of Electronic Cigarette Use in the Veteran Affairs Electronic Health Record: A Pilot Study. BioNLP. Vancouver, Canada. Page: 282–286, August 2017 Notes: Conference proceedings represent peer reviewed research.

Mowery DL, Smith H, Cheney T, Stoddard G, Coppersmith G, Bryan C, Conway M.: Understanding Depression-Related Symptoms And Stressors In Twitter: A Corpus Study. Journal of Medical Internet Research: Mental Health. 19(2): 48, February 28 2017.

Mowery DL, Hill B, Chapman WW, Cannon-Albright L, Majersik JJ.: Development of a Knowledge Base to Support the Automatic Classification of a Computable Ischemic Stroke Phenotype from Electronic Medical Records. Neurology: Genetics. Page: 12-18, March 3 2017.

Mowery DL, South BR, Velupillai S, Murtola LM, Salanterä S, Suominen H, Christensen L, Leng J,Martinez D, Elhadad N, Pradhan S, Savova G, Chapman WW.: Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth 2013 Challenge Task 2. Journal of Biomedical Semantics. doi: 10.1186/s13326-016-0084-y. 7(43), July 1 2016.

Shah RU, Rupp A, Mowery D, Zhang M, Stoddard G, Deshmukh V, Bray BE, Hess R, Rondina MT.: Stroke Prevention Rates In Atrial Fibrillation Before And After Introduction Of Direct Oral Anticoagulants. Neuroepidemiology. 47(3-4): 201-209, January 31 2016.

Mowery DL, Chapman WW, Chapman BE, Conway M, South BR, Madden E, Keyhani S. : Extracting a Stroke Phenotype Risk Factor from Veteran Health Administration Clinical Reports: An Information Content Analysis. Journal of Biomedical Semantics. 7(26): 1-12, May 10 2016.

Scuba W, Tharp M, Mowery D, Tseytlin E, Liu Y, Drews FA, Chapman WW. : Knowledge Author:Facilitating User-Driven, Domain Content Development To Support Clinical Information Extraction. Journal of Biomedical Semantics. 7(42), June 23 2016.

Conway M, Khojoyon A, Fana F, Scuba W, Tharp M, Mowery D, Chapman WW, Jopp S.: Developing A Web-Based SKOS Editor. Journal of Biomedical Semantics. 2016. 7(5). 7(5), December 15 2016.

Velupillai S, Mowery DL, South BR, Kvist M, Dalianis H.: Recent Advances in Clinical Natural Language Processing in Support of Semantic Analysis. International Medical Informatics Association Yearbook. doi: 10.15265/IY-2015-009 10(1): 183-193, August 13 2015.

South BR, Mowery DL, Suo Y, Ferrández O, Meystre SM, Chapman WW.: Evaluating The Effects Of Machine Pre-Annotation And An Interactive Annotation Interface On Manual De-Identification Of Clinical Text. J Biomed Inform. Special Issue: Medical Privacy. 50: 162-72, August 2014.

Liadh K, Goeuriot L, Suominen H, Mowery DL, Velupillai S, Chapman WW, Zuccon G, Palotti J.: Overview of the ShARe/CLEF eHealth Evaluation Lab 2014. Information Access Evaluation. Multilinguality, Multimodality, and Interaction Lecture Notes in Computer Science. 8685: 172-191, 2014.

Velupillai S, Skeppstedt M, Kvist M, Mowery DL, Chapman BE, Dalianis H, Chapman WW.: Cue-Based Assertion Classification For Swedish Clinical Text – Developing An Assertion Lexicon For Pycontextswe. AIIM: Text Mining and Information Analysis. 61(3): 137-44, July 2014.

Suominen H, Salantarä S, Velupillai S, Chapman WW, Savova G, Elhadad N, Pradhan S, South BR,Mowery DL, Leveling J, Kelly L, Goeuriot L, Martinez D, Zuccon G.: Overview of the ShARe/CLEF eHealth evaluation lab 2013. Information Access Evaluation. Multilinguality, Multimodality, and Visualization. Lecture Notes in Computer Science. Springer, Berlin, Heidelberg, 8138: 212-231, 2013 Notes: Conference proceedings represent peer reviewed research.

Chapman WW, Hilert D, Velupillai S, Kvist M, Skeppstedt M, Chapman BE, Conway M, Tharp M,Mowery DL, Deleger L.: Extending The Negex Lexicon For Multiple Languages. Stud Health Technol Inform. 192: 677-81, 2013 Notes: Conference proceedings represent peer reviewed research.

Mowery DL, Wiebe J, Visweswaran SH, Harkema H, Chapman WW.: Building An Automated SOAP Classifier For Emergency Department Reports. J Biomed Inform. 45: 71-81, 2012 Notes: 1st place poster award.

Guo J, Mowery DL, Lai D, Sward K, Conway M.: A Corpus Analysis of Social Connections and Social Isolation in Adolescents Suffering from Depressive Disorders. CLPsych 2017. Vancouver, BC. August 3 2017 Notes: Conference proceedings represent peer reviewed research.

Velupillai S, Mowery DL, Conway M, Hurdle J, Kious B.: Vocabulary Development for Substance Abuse Information Extraction from Psychiatry Notes. BioNLP. Berlin, Germany. Page: 92-101, August 2016 Notes: Conference proceedings represent peer reviewed research.

Chapman BE, Mowery DL, Narasimhan E, Patel N, Chapman WW, Heilbrun ME.: Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiograph Reports to Referring Physicians. BioNLP. Berlin, Germany. Page: 181-185, August 2016 Notes: Conference proceedings represent peer reviewed research.

Doing-Harris K, Mowery DL, Chapman WW, Daniels C, Conway M.: Understanding Patient Satisfaction With Received Healthcare Services: A Natural Language Processing Approach. AMIA Symp Proc. Chicago, IL. Page: 524-533, Feb 10 2016 Notes: Conference proceedings represent peer reviewed research.

Velupillai S, Mowery DL, Abdelrahman S, Christensen L, Chapman WW.: Toward a Generalizable Time Expression Model for Temporal Reasoning in Clinical Notes. AMIA Symp Proc. San Francisco, CA. Page: 1252–1259, Nov 5 2015 Notes: Conference proceedings represent peer reviewed research.

Mowery DL, Jordan P, Wiebe J, Harkema H, Dowling J, Chapman WW.: Semantic Annotation Of Clinical Events For Generating A Problem List. MAMIA Symp Proc. Washington, DC. Page: 1032–1041, Nov 16 2013 Notes: 3rd place Student Paper Competition. Conference proceedings represent peer reviewed research.

Keyhani S, Vali M, South B, Christensen L, Mowery D, Chapman WW, Walter L.: Using Natural Language Processing to Extract Social Determinants of Health and Improve 30-day Readmission Models. Society for General Internal Medicine. 2017.

Bucher B, Mowery DL, Castine M, Chapman WW.: Towards Automatic Detection of Surgical Site Infections. 2017 Joint Summits on Translational Science. San Francisco, CA. 2017.

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Last updated: 10/28/2018
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