Ranawaka Perera, FRCPath,PDipMDPath,PDipID,PhD
Research Assistant Professor of Microbiology
Research Coordinator, Department of Veterans Affairs
Scientific Director Biosafety Level-3 Facility, Perelman School of Medicine
Responsible Officer Federal Select Agent Program, The Perelman School of Medicine
Department: Microbiology
Contact information
Johnson Pavilion
Philadelphia, PA 19104
Philadelphia, PA 19104
Publications
Permanent linkDescription of Research Expertise
I conduct research studies on zoonotic respiratory viruses that infect humans, domestic and peri-domestic animals, and persistently circulate in wild animals.My work has advanced understanding of influenza virus transmission dynamics at the animal–human interface, including forward zoonosis from swine and avian reservoirs to humans and reverse zoonosis from humans back to animals. Through detailed mechanistic studies, I have elucidated the roles of innate and humoral immunity in these transmission events, defined the protective efficacy of specific immune responses, and evaluated the effectiveness of novel vaccine and therapeutic strategies. This body of research—published in high-impact journals and cited more than 100 times in several key papers—directly informed public health measures that helped mitigate influenza-related morbidity and mortality during and after the 2009 H1N1 pandemic.
During the 2012 Middle East Respiratory Syndrome Coronavirus (MERS-CoV) outbreak, which carried a case-fatality rate of approximately 36%, I led investigations into human infections across Europe, Asia, Saudi Arabia, and Africa. My studies were among the first to conclusively identify dromedary camels as the primary reservoir and direct source of human MERS-CoV transmission. In collaboration with international partners, I performed comprehensive immunopathological and virological analyses in both camels and humans. These findings provided critical evidence that shaped World Health Organization (WHO) guidelines for preventing camel-to-human transmission. I continue to investigate the pathology and immune responses elicited by distinct Clade C MERS-CoV strains circulating in camels and other animals across the Arabian Peninsula and Africa. In recognition of this work, I was appointed to the WHO Expert Panel on MERS-CoV and have designed and delivered laboratory diagnostics and One Health training programs for researchers in Saudi Arabia and Africa.
At the onset of the COVID-19 pandemic, I conducted multiple studies characterizing SARS-CoV-2 transmission kinetics, tissue tropism, and disease severity across age groups and populations, including both humans and animals. These investigations helped inform early revisions to quarantine and control measures. I have also examined the innate and humoral immune factors governing human-to-animal transmission of SARS-CoV-2 variants of concern. In parallel, I am actively studying strategies to mitigate SARS-CoV-2 infection in immunocompromised patients in Pennsylvania, particularly those with hematological malignancies who respond poorly to current vaccines.
My long-term goal is to establish a mechanistic framework that anticipates and prevents zoonotic spillover of respiratory viruses while developing broadly protective vaccines and novel therapeutics to safeguard both animal and human health on a global scale.
Selected Publications
Arunachalam, PS, Wimmers, F, Mok, CKP, Perera, RAPM, Scott, M, Hagan, T, Sigal, N, Feng, Y, Bristow, L, Tak-Yin, Tsang, O, Wagh, D, Coller, J, Pellegrini, KL, Kazmin, D, Alaaeddine, G, Leung, WS, Chan, JMC, Chik, TSH, Choi, CYC, Huerta, C, Paine-McCullough, M, Lv, H, Anderson, E, Edupuganti, S, Upadhyay, AA, Bosinger, SE, Maecker, HT, Khatri, P, Rouphael, N, Peiris, M, Pulendran, B.: Systems biological assessment of immunity to mild versus severe COVID-19 infection in humans. Science 369: 1210-1220, Sep 2020.Sia SF, Yan LM, Chin AWH, Fung K, Choy KT, Wong AYL, Kaewpreedee P, Perera RAPM, Poon LLM, Nicholls JM, Peiris M, Yen HL.: Pathogenesis and transmission of SARS-CoV-2 in golden hamsters. Nature 583: 834-838, May 2020.
Perera, RAPM, Tso, E, Tsang, OTY, Tsang, DNC, Fung, K, Leung, YWY, Chin, AWH, Chu, DKW, Cheng, SMS, Poon, LLM, Chuang, VWM, Peiris M: SARS-CoV-2 Virus Culture and Subgenomic RNA for Respiratory Specimens from Patients with Mild Coronavirus Disease. Emerging Infectious Diseases 26(11): 2701-2704, NOV 2020.
Perera, RAPM, Ko, R, Tsang, OTY, Hui, DSC, Kwan, MYM, Brackman, CJ, To, EMW, Yen, HL, Leung, K, ChengSMS, Chan, KH, Chan, KCK, Li, KC, Saif, L, Barrs, VR, Wu, JT, Sit, THC, Poon, LLM, Peiris, M: Evaluation of a SARS-CoV-2 Surrogate Virus Neutralization Test for Detection of Antibody in Human, Canine, Cat, and Hamster Sera. Journal Of Clinical Microbiology 59(2), FEB 2021.
Zhou ZQ, Hui KPY, So RTY, Lv HB, Perera RAPM, Chu DKW, Gelaye E, Oyas, H, Njagi O, Abayneh T, Kuria W, Walelign E, Wanglia R, El Masry I, Von Dobschuetz S, Kalpravidh W, Chevalier V, Miguel E, Fassi-Fihri O, Trarore A, Liang WW, Wang YQ, Nicholls JM, Zhao JC, Chan MCW, Poon LLM, Mok CKP, Peiris M: Phenotypic and genetic characterization of MERS coronaviruses from Africa to understand their zoonotic potential. Proceedings Of The National Academy Of Sciences Of The United States Of America 118(25), JUN 22 2021.
Perera, RAPM, Riley, S, Ma, SK, Zhu, HC, Guan, Y, Peiris, JSM: Seroconversion to Pandemic (H1N1) 2009 Virus and Cross-Reactive Immunity to Other Swine Influenza Viruses. Emerging Infectious Diseases 17(10): 1897-1899, OCT 2011.
Sit THC, Brackman CJ, Ip SM, Tam KWS, Law PYT, To EMW, Yu VYT, Sims LD, Tsang DNC, Chu DKW, Perera RAPM, Poon LLM, Peiris M: Infection of dogs with SARS-CoV-2. Nature 586(7831): 776, OCT 29 2020.
Hui KPY, Cheung MC, Perera RAPM, Ng KC, Bui CHT, Ho JCW, Ng MMT, Kuok DIT, Shih KC, Tsao SW, Poon LLM, Peiris M, Nicholls JM, Chan MCW: Tropism, replication competence, and innate immune responses of the coronavirus SARS-CoV-2 in human respiratory tract and conjunctiva: an analysis in ex-vivo and in-vitro cultures. Lancet Respiratory Medicine 8(7): 687-695, JUL 2020.
Hachim, A, Kavian, N, Cohen, CA, Chin, AWH, Chu, DKW, Mok, CKP, Tsang, OTY, Yeung, YC, Perera, RAPM, Poon, LLM, Peiris, JSM, Valkenburg, SA: ORF8 and ORF3b antibodies are accurate serological markers of early and late SARS-CoV-2 infection. Nature Immunology 21(10): 1293, OCT 2020.
Mok, CKP, Zhu, AR, Zhao, JX, Lau, EHY, Wang, JX, Chen ,Z, Zhuang, Z, Wang, YQ, Alshukairi, AN, Baharoon, SA, Wang, WL, Tan ,WJ, Liang, WW, Oladipo, JO, Perera, RAPM, Kuranga, SA, Peiris, M, Zhao, JC: T-cell responses to MERS coronavirus infection in people with occupational exposure to dromedary camels in Nigeria: an observational cohort study. Lancet Infectious Diseases 21(3): 385-395, MAR 2021.
